Shewanella rhizosphaerae: K0I63_06345
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Entry
K0I63_06345 CDS
T09262
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srhs03000
]
K0I63_06345
Transcription factors [BR:
srhs03000
]
Prokaryotic type
Helix-turn-helix
LysR family
K0I63_06345
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
HTH_5
HTH_20
HTH_30
MarR_2
PBP_like
Motif
Other DBs
NCBI-ProteinID:
QYK14125
LinkDB
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Position
complement(1426069..1427010)
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AA seq
313 aa
AA seq
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MSLRLQAHLGTLRQMEILLAVYDSGSVSGAAETLHLTQPTISMQLKKLADVIGFPLYNIV
GRKVVFTEAGLEVVKSATEILDSFARLEMSLSDMGELKSGTLRLAVVTTSKYFIPHLLGP
FCERYPNVAVQLNVGNRQQIIERLKQGIDDFYVFSHPPADLNTESIEFFNNPLVAIAQEN
HPLVSQDGVSLAELCEAPFLMRENGSGTRLAIERFMAKQGVKLNVKMTIESNEAIKHSVM
SGLGVSILSAHTLAFGGNTGLAQLNVKELPINSNWYFLWLKSKRPSAIAQAFLTHVESEG
REMLLTELAKHRL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcagactacaggcacatcttggtaccctcaggcagatggagatcttgctggct
gtctatgatagcggcagcgtcagcggcgccgccgagaccctgcacctcactcaacccacc
atctcgatgcagcttaagaagctcgccgatgtgataggtttccccctgtataacatagtg
ggtcgcaaggtggtgtttaccgaggcggggctggaggtggttaaatcggccacagagatc
ctcgacagctttgcgaggctggagatgtcgctctcggacatgggggagctcaaatcgggt
accctgcgcctagctgtggtgaccacctcgaaatactttattccccacctgctcggcccc
ttctgcgagcgctatcccaatgtcgcagtgcagctaaatgtcggtaaccgccagcagatc
attgagcgcctcaaacagggcatcgacgacttctacgtgtttagtcatccaccggcggat
ctcaacacagagagtatcgaattcttcaataatcccctggtggctattgcccaggagaat
catcccctagtcagtcaggatggcgtctcgttagccgagctctgtgaggcgcccttcttg
atgcgtgagaatggctcgggcacccgcttggccatcgagcgtttcatggcgaaacagggg
gtgaagcttaacgttaagatgaccatagagagcaacgaggcaatcaaacactcggtcatg
tctggactgggcgtcagcatactctcggcccataccctcgcctttggcggcaataccggg
ctggcgcagctgaatgtgaaggagctgccgatcaactccaactggtattttctctggctt
aaatcaaaacgtccctcggcaatcgctcaggccttcttgacccatgtggaaagcgaggga
cgcgagatgctactcaccgagctggcaaaacacaggctttag
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