KEGG   Shewanella rhizosphaerae: K0I63_07315
Entry
K0I63_07315       CDS       T09262                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
srhs  Shewanella rhizosphaerae
Pathway
srhs02020  Two-component system
Brite
KEGG Orthology (KO) [BR:srhs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K0I63_07315
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:srhs02022]
    K0I63_07315
Two-component system [BR:srhs02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   K0I63_07315
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_2 HTH_50 AAA_16 AAA_3 Mg_chelatase AAA AAA_7 ATPase
Other DBs
NCBI-ProteinID: QYK14301
LinkDB
Position
complement(1640762..1642129)
AA seq 455 aa
MQNQVFNQYDILIVDDEPLIGSALVQLFELESYRALALTDAKQIGLGLPDNWPGIVISDV
NMPDIDGLSLMRTLLAQDKDIPIILLTGHGDIAMAVQALKQGAYDFIEKPFNNEHMLDIA
KRALEKRALTLENRSLKRELESQSTPGPRILGHSPGIKQMRHIIHQVIDMPADVLIEGET
GTGKELVARYLHDHSPRAEANFVAINCGAIPETIIESELFGAESGAFTGADKTRIGKFEY
ANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSIDLDIRIIAATKVDLKSLCDT
GEFRQDLLYRLNLVTVPIPALRERREDIGLLFLHFARVASARYHKALIPLTAEYTAQLVS
HDWPGNVRELRNLAERYVLLGPEAAFATSLGQSSQLNANMSLQQRVEFFERLLIEEALSN
NKGSIKLTMEQLELPRKTLYDKMQKFGLNRKTFIN
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgcaaaatcaagtttttaatcaatacgacatcttaatcgtcgatgacgagcccctgata
ggctcggcgctggtacagctgtttgaactggaatcctaccgcgccctggccctcaccgac
gccaaacagattggcctgggcctgcccgacaactggccgggcatagtgatctcagacgtg
aacatgccagatattgacggcctgtcgctgatgcgcaccctgctggctcaggacaaggat
attcccatcatactgctgaccggccacggtgatatcgccatggcggtgcaggcgctgaaa
cagggagcctatgattttatcgagaaaccctttaacaatgagcacatgctggatatcgcc
aagcgcgcgctggagaaacgcgccctgaccctggaaaaccgcagcctgaaacgtgagctg
gaatcccagagcaccccagggccgcgcattctgggccacagcccggggatcaagcagatg
cgccacatcatccatcaggtgatcgacatgcccgccgatgtgttaattgaaggcgagaca
ggcacgggcaaggagctggtcgcccgctatctgcatgaccatagccctcgagccgaagcc
aacttcgttgccatcaactgcggcgccatcccagagaccatcatagagagcgagctgttt
ggcgccgaatctggtgccttcaccggcgcagataagacacgtatcggcaagttcgagtat
gccaacggcggcaccctgtttctcgacgagattgagagcacgccgctatccttgcaggtt
aagctgctcagggtgttggaagacaggaaggtggagcgcctcggctccaataagagcata
gacctggatattcgcatcattgccgccactaaggtggatctcaagagtctgtgcgacacc
ggcgagtttcgccaggatctcctctatcgcctcaatctggtgacagtgccgattccggcc
ctcagggagcgtcgcgaagatatcggtcttctgtttctgcatttcgcccgggtcgcctcg
gcccgttatcacaaggcgctgatccccctgacggccgaatacacggcccagctggtctcc
cacgactggcccggtaatgtcagggagctacgcaatctggccgagcgttatgtgctctta
gggccagaggcggcctttgccacctccctaggacagagcagtcaactcaacgccaacatg
tcgctgcagcagcgggtggagtttttcgagcgcctgctaatcgaagaggcgctaagtaac
aacaagggcagcatcaagctcaccatggagcagctggaacttccgcgcaaaaccctctat
gacaagatgcagaagttcggcctcaaccgtaagaccttcatcaactaa

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