Shewanella rhizosphaerae: K0I63_07570
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Entry
K0I63_07570 CDS
T09262
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhs03400
]
K0I63_07570 (phrB)
Enzymes [BR:
srhs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K0I63_07570 (phrB)
DNA repair and recombination proteins [BR:
srhs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K0I63_07570 (phrB)
Prokaryotic type
K0I63_07570 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QYK14331
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All DBs
Position
1684642..1686078
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AA seq
478 aa
AA seq
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MSALLWLRRDFRLHDNPALSEAVRLGVKQALFIATPAQWQQHEMAPIKVDLIRRHLELMA
GGLAEYGIELVILSATDFGDQVRALCDHCRDHGVNLLLANSEPELDEQERDKQVMAAGID
LRLWQNDTILPPGSVLNQQGEMFKVFTPFKKAWLKCVAAKGIECVPTPAKSTPAKLVGDA
QAASQLPQQPTLQSSSINLDYPLEDSSRWPDSEQVMSQLLPHFWQDKLLNYGERRDFPAI
KGTSGLSPYLAIGAISSRWLALQLVQRHPEVIYDTLHGAFTWLNELIWRDFYKHLLFHYP
ELIKGRSFQSKYESLPWPNNEAHFQAWCEGRTGYPIVDAAMKQLRRTGWMHNRLRMIVAS
FLTKHLLVDWHKGERFFMQQLIDGDFSANNGGWQWAASTGCDAQPYFRIFNPITQSQKFD
PRGDFIRKYLPELREVPDKQIHFPHDYLASQGKAEIYPAPIVDHKAARQRALAFYKVE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcactcttgtggctgagacgggatttccgtctccatgataatcccgccttgagt
gaggcggtgcggctcggggtgaaacaggcgctctttatcgccaccccggcccagtggcag
caacatgagatggcgccgataaaggtcgatctcattcgtcgtcacctcgagttgatggca
ggtgggttagctgagtacggaatcgagctggtcatcttatccgccacagattttggcgat
caggtgagggcgttatgcgaccactgccgcgaccatggcgtcaacctgctgctggccaac
agcgagcctgagctcgatgagcaggagcgcgacaaacaggtgatggcggcggggatcgat
ctgcgcctgtggcaaaacgataccatcttgccgccgggcagcgtgctcaaccagcagggg
gagatgtttaaggtctttaccccctttaagaaggcctggctcaagtgtgtggcggcgaag
ggcatagagtgtgtgccgacgccggcaaaatcgacgccggctaaattggtcggtgatgct
caagcagcgtctcagcttccccaacagccaacactacaatcatcaagcatcaacctagat
tatcccctggaggactccagccgctggcccgacagtgagcaagtgatgagccagctgctg
ccccatttctggcaagacaagctgctcaattatggtgagcggcgcgactttccggccatc
aagggaacatcaggcttgtcgccttatctggccataggggcgattagctcgcgctggctg
gcgctgcaattggtgcagcgtcatcccgaggtgatctacgacactctgcacggcgccttc
acctggctcaacgagctgatctggagggatttttacaaacatctattgtttcactatcca
gagcttatcaagggcagaagctttcagtccaagtacgagtcgctgccctggcccaataac
gaggcacactttcaggcctggtgtgaggggcgcaccggctaccccatagtcgatgcggcc
atgaaacagctccgccgtaccggctggatgcacaatcgcctgcgtatgatagtggcgagt
tttctcaccaagcacttgctggtggactggcacaagggcgagcgcttcttcatgcagcag
ctgatcgacggtgatttcagtgctaacaacggcggctggcagtgggccgccagcacgggc
tgcgatgcccagccctattttaggatctttaaccccatcacccagagccaaaagtttgat
cctcggggtgacttcatccgtaagtatctaccagagttgagagaggtgcccgacaagcag
atccacttcccccacgactacttagcgagtcagggcaaggctgagatctaccctgcgccg
atagtggaccataaggcggcgcgccaaagggccctggcattttataaggtggaatag
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