Shewanella rhizosphaerae: K0I63_08095
Help
Entry
K0I63_08095 CDS
T09262
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs03030
DNA replication
srhs03430
Mismatch repair
srhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0I63_08095 (holB)
03430 Mismatch repair
K0I63_08095 (holB)
03440 Homologous recombination
K0I63_08095 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srhs03032
]
K0I63_08095 (holB)
03400 DNA repair and recombination proteins [BR:
srhs03400
]
K0I63_08095 (holB)
Enzymes [BR:
srhs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0I63_08095 (holB)
DNA replication proteins [BR:
srhs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K0I63_08095 (holB)
DNA repair and recombination proteins [BR:
srhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K0I63_08095 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
Mx_ML
DUF3323
FlhD
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-ProteinID:
QYK14907
LinkDB
All DBs
Position
1787049..1787963
Genome browser
AA seq
304 aa
AA seq
DB search
MDLPWLTPAREAFCSQLISGQQGHAYLLGIHQGYGGMQLANTLAQASLCMAPRANGACGV
CKSCQLFIAGNHPDCYQLEADGNQIKVDQVRELCQKLTATAQQGGRRVAVIKNCERLNTA
AANALLKTLEEPGRETLLLLQSDTPSRLMATISSRCQRLHCQLPSREAVQEWLAAQFNLT
SDVTWCLPVVGGPVDLLTALNDGRYEGLIGLRKAWVQSLSSGHLCANLTNIDEKQVSDAL
KVLYVVLRQKLVKQKNADALINIKITKFAAKVMETYHSLSMMPNVNFMAVFQAFILEYQS
LTTS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggatctaccttggttaaccccggctcgtgaggctttctgtagtcagctgatatctggc
cagcagggccacgcctatctgttggggatccaccaaggctatggcggcatgcaacttgcc
aataccttggctcaggccagtctgtgtatggcgccgagggccaatggcgcctgcggagtc
tgtaagagctgtcagctgtttatcgccggtaaccatccagattgctatcagctggaggcc
gacggcaatcagatcaaggtagatcaagtcagggagctgtgtcagaagttgaccgccacc
gcccagcaagggggcaggcgggtcgctgtgattaaaaactgtgagcgactcaacaccgcg
gcggccaacgccctgttgaagaccctggaagagccgggcagagagaccctcttgttgcta
cagagtgatacccccagtcgtttgatggctaccataagcagtcgttgtcagcgcctgcat
tgccagctgccgagtcgcgaggcggtgcaggaatggctggcggcgcagtttaacctaaca
agtgacgtgacctggtgtctgccggttgtcggcggccctgtcgatctgctcactgcctta
aatgacggtcgctatgagggcttgatcggcctcagaaaagcctgggtgcaaagtttgtcg
tctgggcacctgtgtgctaacttaactaatatagatgaaaagcaagtttctgatgcactt
aaggttttgtatgttgtcctgcgacaaaaactggtgaagcagaaaaatgctgatgcatta
attaacatcaagataacaaaatttgcagccaaggttatggagacgtatcatagcctgagt
atgatgcctaatgtgaattttatggccgtttttcaggcgtttatcttagagtatcagtcg
ctaacaacaagttaa
DBGET
integrated database retrieval system
