Shewanella rhizosphaerae: K0I63_08390
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Entry
K0I63_08390 CDS
T09262
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K0I63_08390 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_08390 (msbA)
Enzymes [BR:
srhs01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
K0I63_08390 (msbA)
Transporters [BR:
srhs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
K0I63_08390 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
nSTAND3
RsgA_GTPase
AAA_22
AAA_15
AAA_24
AAA_16
NB-ARC
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
QYK14482
LinkDB
All DBs
Position
1852102..1853916
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AA seq
604 aa
AA seq
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MTNSSKSEVGSVFLRLLTYLVPLKGVLFLSVFGLVLYGLVDATFIYSIKPFIDQGFASNV
PTTPGLVEGVDLGMGGGFNSDSDVLKTAPFVVIGLFTLRGLANFLSTYGISYISARMIMD
MRQQVFEHYLRLPVSYIDAESSGNLISRVTFDTEQIARASGSALITIVRDGITVIGMLGV
MFYNSWKLSLCILIVGPLIGLVIAVVSRKFRKVSKQIQTAMGGVTSVTEQMIKGHKNVLV
FGGQQAESQRFAKVNDDNRSRTMKLALAQAISQPLVMVIGSLALAFVLYASSLESMRADL
TAGTFATILAAMLAMLQPIKSLTRVNAEFQRGIAACSTIFAVLDTPAEVDNGTFETKRVE
GRLSFDKVNFRYNNQEGLALKEVDFQVNPGETLALVGRSGSGKSTIASLITRFYSDLDSG
DIRLDDVSLRDYKLAALRRQVALVSQQVTLINDTIAANIAYAYPGEVTEEQIIDAAKLAN
AWEFICNMPEGIYTQVGENGVMLSGGQRQRIAIARAILRDAPILILDEATSALDTESEKA
IQMGLDNLRQNRTSIVIAHRLSTVENANQILVVDQGKVVERGTHSELLAKQGIYYNLYQM
QFGS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattcttcgaaaagtgaagttggcagcgtttttctcagactgctcacttatctt
gtcccgctcaaaggggtgttatttttgtctgtgtttggccttgtgctttacggcttggtg
gacgcaacctttatttattcaattaaaccttttattgatcaaggttttgccagcaatgtg
ccgaccacgcctggcttggttgaaggggtcgaccttggcatgggcggcggctttaactcc
gacagcgacgtgctcaaaaccgcgcctttcgtggtgattggcctgtttaccctgaggggc
ctggctaactttctctccacctatgggatctcttatatcagtgcgcgcatgatcatggat
atgcgtcagcaggtgtttgagcattacctgagattgccagtgagctatatcgatgcggaa
agcagcggtaacttgatctcccgggtgactttcgataccgagcagatcgccagggcatcg
ggcagtgcgctgattaccatagtgcgtgacggcatcacagtgatcggcatgctgggggtg
atgttctacaactcctggaaactctcgctctgtatcctgattgtcgggccccttatcggc
ttggtgattgccgtggtcagccgtaagttccgcaaggtctctaaacagatccagaccgcc
atgggcggcgtgacctcggttaccgagcagatgatcaagggccataaaaacgtgttggtc
ttcggtggtcaacaggccgagtcgcaacgtttcgctaaggtaaatgacgacaaccgttcg
cgcaccatgaagctggctctggcccaggcgatcagtcaacctttggtaatggtcattggc
tcactggcactggccttcgtgctttatgcctcgagccttgagagcatgcgcgccgatctc
accgcgggtaccttcgccactatcttggcggccatgctcgccatgttgcagccaatcaag
agtctgacccgcgtcaacgccgagtttcagcgtggtatcgccgcctgtagtaccatcttt
gccgtgttagataccccggccgaggtggataacggcaccttcgagaccaaaagagtcgag
ggtcgcttgagcttcgataaggtcaacttccgctacaacaatcaggaaggcttggcgtta
aaagaggtggattttcaggttaatccgggtgaaaccttggccctggtgggacgcagtggc
tcgggcaagtcgaccattgccagcctgatcacccgcttctattcggacctcgacagcggt
gatattcgcttggatgatgtgagcctgagagattacaaactggcggcgctgcgccgtcag
gtggcattggtgtcacagcaggtgacgttgatcaacgataccatagccgcgaatatcgcc
tatgcctatccgggcgaggtcaccgaggagcagatcatcgatgcggctaagctcgccaat
gcctgggagtttatctgcaacatgcccgaggggatctatacccaggtcggcgaaaacggc
gtcatgctctcaggtggtcagcgccagcgtatcgccattgccagggcgatactgcgcgat
gcgcctatcttgatcctcgatgaggcgacctcggcgctggataccgagtcggagaaggct
attcagatgggtctggataacctcagacagaatcgcacatctatcgtgatcgctcaccgt
ctgtcgaccgttgaaaatgccaaccagatcttggtggtggatcagggcaaggtggtcgag
cgcggcacccatagcgagctactggctaagcaggggatctattacaacctgtaccagatg
cagtttggtagttaa
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