KEGG   Shewanella rhizosphaerae: K0I63_09670
Entry
K0I63_09670       CDS       T09262                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
srhs  Shewanella rhizosphaerae
Pathway
srhs03030  DNA replication
srhs03430  Mismatch repair
srhs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:srhs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K0I63_09670
   03430 Mismatch repair
    K0I63_09670
   03440 Homologous recombination
    K0I63_09670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:srhs03032]
    K0I63_09670
   03400 DNA repair and recombination proteins [BR:srhs03400]
    K0I63_09670
Enzymes [BR:srhs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K0I63_09670
DNA replication proteins [BR:srhs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     K0I63_09670
DNA repair and recombination proteins [BR:srhs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     K0I63_09670
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QYK14719
LinkDB
Position
complement(2155520..2156134)
AA seq 204 aa
MSQDAIVVLDFETTGLSPLQGDRAIEIGAVKLQQGVVVDRFQQLMNPGFAVSSFIADYTG
ITNAMLSDAPGCETVMADFADFIQGCHLVAHNASFDQKFLAAEFARINLEQSQPFACSLL
LARRLFQAAPNHQLGTLVNYLGIANDGVFHRALNDAEVTGALWLALSDAVSQRWACPAPS
FELMLKLQRQPKHQLEKFMRSHLG
NT seq 615 nt   +upstreamnt  +downstreamnt
atgtcccaagatgccatagtggtattggattttgaaaccacaggcctctcccccttacag
ggcgatcgcgccatcgagataggggcggttaaattacagcaaggtgtagtggtcgataga
tttcagcagctgatgaatcccggctttgccgtcagtagtttcatcgccgattacacaggg
atcaccaatgcgatgctcagtgatgcgccaggttgcgagaccgtcatggctgactttgcc
gacttcatccagggatgtcatctggtggctcacaacgccagtttcgatcagaaattttta
gcggcggaatttgcgcgcatcaacctggagcaatcccagccctttgcctgttcgctgctg
ctggcaagacgcctgtttcaggcggcgcctaaccatcagctaggcaccttagtgaattat
ttaggtatcgccaacgatggcgtgtttcaccgcgcgctgaacgacgcagaggtcaccggc
gccttgtggctggcgctgagcgatgcggtatcacaaagatgggcctgccctgcacccagt
tttgaattgatgcttaagctgcaacgtcagcccaagcatcagctagagaaatttatgcgg
agccatttaggctaa

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