Shewanella rhizosphaerae: K0I63_10070
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Entry
K0I63_10070 CDS
T09262
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srhs03032
]
K0I63_10070 (gyrA)
03400 DNA repair and recombination proteins [BR:
srhs03400
]
K0I63_10070 (gyrA)
Enzymes [BR:
srhs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K0I63_10070 (gyrA)
DNA replication proteins [BR:
srhs03032
]
Prokaryotic type
DNA Topoisomerases
K0I63_10070 (gyrA)
DNA repair and recombination proteins [BR:
srhs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K0I63_10070 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QYK14794
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Position
2257516..2260155
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AA seq
879 aa
AA seq
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MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYTLVDGQGNFGSVDGDAAAAM
RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRIPALLVNGSSGIAVGMAT
NIPPHNLSEVISGCLALIDEPSLSIEQLMEHIPGPDFPTAAIVNGRKGIEDAYKTGRGKA
VMRARATVETEDNGRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVIEVKRGEVGEVILNNLYAQTQLQTSFGINMVALTNGQPKLFNLKEMLECFILHRREV
VTRRTVFELRKARERAHILEALAIALANIDPIIALIKASPTPAEAKTKLVSQGWALGNVQ
GMLEKAGDDAARPEWLSAEFGIRDGLYYLTEQQAQAILDLRLHKLTGLEHEKILSEYEEL
LELIAALLYILRSPERLMEVIKEELQEVLEVFGDERRTELNASAVDISLEDLINEEDVVV
TLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYW
LKVYQLPLASRQARGRPIINLLPLAEGERITAILPVRDYDADKYVIMATSHGTVKKTSLD
QYSRPRANGIIAVNLKDGDQLIGVDITNGDNEVMLFSNEGKVVRFSEDQVRGMGRTATGV
RGIKLEDGQSVVSLIVPKNDGAILTVTENGYGKRTELDEYPAKSRATKGVVSIKVSERNG
AVVGAVQVLENDEIMLISDKGTLVRTPASGVSTIGRNTQGVTIIRTATDETVVGLQRIDE
IQDEQEFDEEGNPIITDTVDEQQVEGEAPEAEPDVEPNE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcttcatctataacaccaattaatattgaagacgaattaaagaattca
tatttggattacgctatgagcgtgatcgttggccgtgcgttacccgatgtacgtgacggt
ctaaagccggttcatcgccgcgtattattcgcgatgaacgagttgaagaacgattggaac
aaaccttataagaagtcggcgcgtgtcgtcggtgacgttatcggtaaatatcacccacac
ggtgactctgcagtttacgacaccatcgttcgtatggcgcagcctttctctatgcgctac
accttggtcgatggccagggtaactttggttcggtcgatggcgacgctgcggcggccatg
cgttataccgaaattcgtatggacaagctggcgcatcaactgctggctgacctagagaaa
gaaaccgtagattatgtacctaactatgatggtacagagcagatcccagcggtactgcca
acccgtattccggccctgctggtgaatggttcatcgggcatcgccgtaggtatggcgacc
aacattcctcctcacaacctgtcagaagtgatctccggctgtttggcactgatcgatgag
ccaagtctctctatcgagcagttgatggaacatattccagggccagacttcccaacggcg
gcgatcgtcaacggccgtaagggtatcgaagatgcctataagacgggtcgtggtaaggcg
gtcatgcgtgcccgcgcaaccgttgagactgaagacaacggtcgtgagcgcattatcgtt
accgagatcccttatcaggtaaacaaggcacgtctgatcgaaaagatcgccgagctggta
aaagataagaagatcgaaggcatcagcggcctgcgcgacgagtcagacaaagacggtatg
cgtatcgttatcgaagtaaaacgcggcgaagtgggtgaggtgatcctcaacaacctctac
gcccagactcagctgcagacctctttcggtatcaacatggtggccctgaccaatggtcag
cctaagctgtttaaccttaaagagatgctcgagtgcttcatccttcaccgtcgtgaagtg
gtgacccgtcgtaccgtattcgaactgcgtaaggctcgcgaacgtgctcatatccttgaa
gcactggcgattgcgctggccaacatcgaccctatcatcgcactgatcaaggcgtcacca
acccctgccgaagccaagactaagctggtttctcaaggctgggcccttggcaatgtacaa
ggcatgctggagaaggctggtgatgatgcggcgcgtcctgagtggctgtcggcagagttc
ggtattcgtgatggcctctactacctgaccgagcaacaggctcaggcgattctagacttg
cgtctgcacaagctgaccggtctggaacatgagaagatcctaagcgaatatgaagagctg
ctagagctaatcgcagccctgctatatatcctccgcagccctgagcgtctgatggaagtg
attaaagaagagcttcaggaagtgctagaagtgtttggcgatgagcgtcgcaccgagctt
aacgcctctgcggtcgacatcagcctcgaagatctgatcaacgaagaagatgtggtcgtg
accctgtcgcatctgggttacgccaagtatcagcctttgagcgattaccaggctcagcgc
cgtggtggtaagggtaaagccgcgactaaggtgaaagatgaagatttcgtcgagaaactg
ctagttgccaacacccacgacaccatcttgtgcttctctgacttcggtaagatgtactgg
ctcaaggtgtaccagcttccgctggcaagtcgtcaggctcgtggtcgccctatcatcaat
ctgctgccgctggcggaaggtgagcgcatcaccgctatcttgccggtgcgtgattacgat
gccgacaagtatgtgatcatggcgacctctcacggcaccgtgaagaagacctcgctggat
caatactctcgtccgagagccaacggtattatcgccgttaacctgaaagatggcgaccag
ctgattggcgtcgatatcactaacggtgataacgaggtgatgctcttctctaacgaaggt
aaggtcgttcgctttagcgaagatcaggttcgtggcatgggccgcaccgcaacaggtgtt
cgcggtatcaagctcgaagatggccagagcgtagtctcactcatcgtacctaagaacgac
ggtgcaatcctgaccgttaccgagaatggttatggtaagcgcaccgagctggatgaatac
ccagctaagagccgcgcgaccaagggtgtagtctcgatcaaggtgagcgagcgtaacggc
gccgtcgtcggggcggtacaagtactcgaaaacgacgagatcatgttgatcagcgataag
ggtaccctggttcgtacaccagcatctggcgtatcgactattggtcgtaacactcaaggt
gtgaccattatccgtacggcaaccgacgagacggttgttgggctgcagcgtatcgatgag
atccaagatgaacaggagtttgacgaagagggcaaccctatcatcacggatactgtcgat
gagcagcaagtcgaaggcgaagcgcccgaggccgagccagacgttgagccaaatgaataa
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