Shewanella rhizosphaerae: K0I63_10790
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Entry
K0I63_10790 CDS
T09262
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K0I63_10790 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srhs01007
]
K0I63_10790 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srhs03016
]
K0I63_10790 (aspS)
03029 Mitochondrial biogenesis [BR:
srhs03029
]
K0I63_10790 (aspS)
Enzymes [BR:
srhs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
K0I63_10790 (aspS)
Amino acid related enzymes [BR:
srhs01007
]
Aminoacyl-tRNA synthetase
Class II (A)
K0I63_10790 (aspS)
Transfer RNA biogenesis [BR:
srhs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
K0I63_10790 (aspS)
Prokaryotic type
Other AARSs
K0I63_10790 (aspS)
Mitochondrial biogenesis [BR:
srhs03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
K0I63_10790 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QYK11289
LinkDB
All DBs
Position
complement(2410418..2412196)
Genome browser
AA seq
592 aa
AA seq
DB search
MRSHYCGDVNRSHVGEEVTLVGWVNRSRDLGGVVFLDLRDREGVIQVVYDPDLPEVFDVA
STLRSEFCVQVKGLVRARPDSQINDQMRTGEIEVLGKALTILNSAPALPINMDKNQHNTE
EQRLKYRYLDLRRPEMAERIIFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MTSAQVMDKTEEMVCGLFKELLNVDLGEFPKMTFAEAMRRYGSDKPDLRNPLELVDVADL
VKDVDFKVFQEPANDSEGRVAVLCVPGGASLSRKQLDEYGKYVNIYGAKGLAWMKVNELE
KGLEGIQSPVLKFLSEEVVKGILERTGAANGDLILFGADKANIVAEAMGALRLKVGEDFD
LLQGDWKPLWVVDFPMFERTSDGGLHAMHHPFTAPSGITPAELEADPTAAISDAYDMVLN
GCELGGGSVRIYDAEMQSAVFRILGINDEEAQEKFGFLLEALKYGTPPHAGLAFGLDRMV
MLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLEELGVSVVEAKKEQE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcattattgtggagacgttaatcggtctcatgttggggaagaagttactctc
gtaggttgggttaaccgcagtcgcgatctcggcggcgtggtttttctggatttgcgcgac
cgtgaaggcgtgattcaggtagtatatgatcctgatctgccagaggtattcgatgtcgcc
agcacactgcgcagtgagttctgtgttcaggtcaaaggcctggtgcgtgcacgtccagac
agccagatcaacgaccagatgcgcacaggtgagattgaggtgctgggtaaggccctgacc
atactcaatagcgcaccggcactgccgatcaacatggacaaaaatcaacacaacaccgaa
gagcagcgccttaagtatcgctacctggatctgcgtcgcccagagatggccgagcgcatc
atcttccgctctaaggtgaccagcgccgtgcgtcgtttcctcgacggcaatggtttcctc
gatatcgagacaccaattctgaccaaggcaaccccagagggtgccagggactatctggtg
cctagccgcacctacaagggccagttcttcgcgctgccacaatcgccacagctgtttaaa
cagctgctgatgatgtctggcttcgaccgttactaccagatcgtgaaatgtttccgcgac
gaagacttacgcgccgaccgtcagcctgaatttactcagatcgatatcgaaacctctttc
atgacctcagcgcaggtgatggacaagactgaagagatggtatgcggcctgtttaaagag
ctgctaaacgtcgacctgggcgagttccctaagatgaccttcgccgaagcgatgcgtcgt
tacggctcagacaagccagacctgcgtaacccgctggagttggtcgatgtagccgatctg
gttaaagatgtcgacttcaaggtgttccaggagccagccaacgacagcgaaggccgtgtt
gccgtgctgtgtgtgccgggcggtgctagcctgtcacgtaagcagctcgatgagtatggc
aagtatgtcaacatctatggcgccaaaggcttggcatggatgaaggtcaacgaactggag
aaaggcctggaaggcattcagtcgccagtgcttaagttcttaagcgaagaggtggttaag
gggatcctggagcgcacaggcgcggccaacggtgacctaatcctgtttggcgccgacaag
gcgaacatagtggccgaagccatgggcgcgctgcgtcttaaggtaggtgaagatttcgac
ctgctacaaggcgactggaaaccactatgggtggttgacttcccaatgttcgagcgcacc
tctgacggtggcctgcacgccatgcaccacccgttcactgcgccaagtggtatcacgcca
gccgagctggaagcggatccaacggcggctatctctgatgcctatgacatggtacttaac
ggttgtgaactgggcggtggctcggtacgtatctacgacgccgagatgcagtcggccgta
ttcagaatcctggggatcaacgacgaggaagcccaagagaagtttggcttcctgctcgaa
gcgctcaagtatggtacgccgccacacgcaggtttggcattcggcctagaccgtatggtc
atgctgatgactggtgccagctcgattcgcgacgtgatggccttccctaagaccaccacg
gcagcctgtccgctcaccaatgcccctggctttgccaaccctgtacagctcgaggagctt
ggggtcagcgtagtggaagcgaaaaaagagcaggaataa
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