Shewanella rhizosphaerae: K0I63_10960
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Entry
K0I63_10960 CDS
T09262
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs03030
DNA replication
srhs03430
Mismatch repair
srhs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0I63_10960 (dnaQ)
03430 Mismatch repair
K0I63_10960 (dnaQ)
03440 Homologous recombination
K0I63_10960 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srhs03032
]
K0I63_10960 (dnaQ)
03400 DNA repair and recombination proteins [BR:
srhs03400
]
K0I63_10960 (dnaQ)
Enzymes [BR:
srhs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0I63_10960 (dnaQ)
DNA replication proteins [BR:
srhs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K0I63_10960 (dnaQ)
DNA repair and recombination proteins [BR:
srhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K0I63_10960 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QYK11317
LinkDB
All DBs
Position
complement(2454821..2455549)
Genome browser
AA seq
242 aa
AA seq
DB search
MNIISNAKRQVILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQA
IDEEAITVHGITNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPR
GPKTTDICQVLDSLEIAKFLHPGQKNNLDALCKRYGIDNSRRELHGALLDAEILADVYLI
MTGGQTKFELSNEKPGQESGGIIRLANNRPSLKVIGASADELNMHEQRLDLVEKSGQCIW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatctccaatgctaagcgccaagtgattctcgataccgaaaccacgggtatg
aaccagggggccggtgccgtctattttggccatcgtattatcgagataggctgtgtcgag
gtgattaaccgtaagctgaccggccgccattttcacgaatatatcaacccgatgcaggcg
atcgacgaagaggcgatcacagtgcacggtatcaccaacgagtttgtggccgataagcct
gtgtttgctcagatagccccagcctttctagagtttatcgatggcgccgagattgtggca
cacaacgcgaacttcgacgtgagcttcatggatcacgagttttcgctgcttacccccagg
ggacctaagaccacagatatctgtcaggtactggactcgctggagatcgccaaatttctt
catccaggccagaagaataacctggacgccctgtgtaagcgctacggcatagataactcg
cgtcgcgaactccacggtgcattgttggatgccgagatcttggccgatgtatacctcatc
atgacggggggacagaccaagtttgaactctcaaatgagaaaccggggcaggagagcggt
ggcatcatacgactcgcaaataatcgtccaagccttaaagtgatcggcgcttcggccgat
gaactgaatatgcatgagcaaagattagatttagttgaaaaatcaggacaatgtatttgg
cgaggataa
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