Shewanella rhizosphaerae: K0I63_12130
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Entry
K0I63_12130 CDS
T09262
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
srhs
Shewanella rhizosphaerae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA
HTH_50
AAA_16
AAA_5
HTH_30
AAA_2
nSTAND3
DUF6507
Motif
Other DBs
NCBI-ProteinID:
QYK14952
LinkDB
All DBs
Position
complement(2736659..2738011)
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AA seq
450 aa
AA seq
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MEQPKLHILVVEDEPDQRALIVQMLTANQYLVESADSVEQAIVMIKASAPDLVFSDWKLG
QLTGMDLLNYVRREHPDMGFIIATAYGTITHAVDAMQAGADDYLAKPYQRQSLLLAIEKV
AKSIALKRQNRRLSSELSQQQELVGLVGRSSLMQKVYQRVQRVSATDATVLIGGESGTGK
ELAARALYQLSGRSHKPFVAINCGAIPESLAEAELFGAEKGAYTGANTQKIGKLEAADGG
TVFLDEIGELPLLQQTKLLRFLQEGVISRLGQNSEIKLDVRVIAATHRDLQLEVAEGRFR
EDLYYRLNVVPIHMPALRERPEDIGRLVEHFLKLHANQYGMEVPKLSRDTLKSLLDHSWP
GNVRELANRIERFVLLGDEEEMVQELGTTPQPLDTRRFVLPEAGIEWESFEKDCLRQALD
RFEGNRTKAAKCLGLSYKAFLYRLEKYQLV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcctaagttgcatattttggtggtagaggatgagccggatcagagagcattg
atcgtgcagatgttgacggctaaccagtatttggtggagagcgccgacagcgtcgaacag
gcgatcgtgatgataaaggcatcggcgccggatctggtgttttccgactggaagctgggg
cagttaaccggcatggatctgcttaactatgtgcgccgcgaacatccagatatgggcttt
atcatcgccaccgcctacggcaccatcacccacgcggtggatgccatgcaggcgggagcg
gacgactatctggccaaaccctatcaacgccagagtctgctgttggccatcgagaaggtg
gccaaatctatcgcgctgaagcggcagaaccgtcgtctctcttccgagctgtctcagcag
caggagctggtggggctggtgggacgctcttccctgatgcagaaggtgtatcagagggtg
cagcgggtgagcgccacagatgcaaccgtgctcattggcggcgagagtggcacgggcaag
gagctggcggcgcgggcgctgtatcagctgtcgggccgtagccataagcccttcgtcgcc
atcaactgcggcgctatcccagagtctctggccgaggcggagctgttcggcgccgagaag
ggggcctacacgggggctaatacccagaagataggtaagttggaggcagccgatggcggc
accgtctttctcgatgaaataggcgagctgcccctgctgcaacagaccaagctgctgcgt
ttcttgcaggagggggtgatatcccgcctcgggcagaacagcgagatcaagctggatgtc
agggtgatcgccgcgacccatagggatctgcagctggaggtggccgaggggcgttttcgc
gaggatctctattaccgcctcaacgtggtgcctatccatatgccggcgcttagggagcga
cccgaggatatcggccgactggtggagcactttcttaaactccacgccaatcaatatggc
atggaggtgcccaagctaagccgggataccttaaagtcgctgctggaccatagctggccg
ggtaacgtgcgcgagctggcgaatcgcatcgaacgtttcgtgttactcggcgatgaagag
gagatggtgcaggaactcggcaccacgccgcagccgctggataccaggcgttttgtcttg
cccgaggcgggtatcgagtgggagagtttcgagaaggattgcctgcgtcaggctctggac
cgtttcgaaggcaatcgtaccaaggccgccaagtgtttaggcctgagctataaggccttc
ctctatcggctggagaaatatcagctggtctag
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