Shewanella rhizosphaerae: K0I63_12935
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Entry
K0I63_12935 CDS
T09262
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srhs03000
]
K0I63_12935 (pspF)
Transcription factors [BR:
srhs03000
]
Prokaryotic type
Other transcription factors
Others
K0I63_12935 (pspF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
Mg_chelatase
AAA_2
AAA
bpMoxR
HTH_28
AAA_16
HTH_23
AAA_7
AAA_22
nSTAND3
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QYK11677
LinkDB
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Position
2937815..2938885
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AA seq
356 aa
AA seq
DB search
MANQFQQDNLIGQSNALLEVLEHVSKIAPLSKPVLIIGERGTGKELIAERLHYLSKRWDQ
SFIKLNCSSLSENLLESELFGHDAGAFTGANKKHEGRFERADGGTLFLDELANTSGLIQE
KLLRVIEYGEFERVGGSKTVQTDVRLVCAANEDLPSLAEAGEFRADLLDRLAFDVITLPP
LRHRPEDIMPLAEYFAIGMARQLKQPQFDGFSRNAIDQLLDYHWPGNIRELKNVVERAVY
RNTDLEEPIDSIIIDPFASPYRPTNRVKTKSRQVQSEPIAEQESPATPATESRSEAKGLD
ISFPLDFKEHCEQQEIMLLKKALESGQYNQKKTAELLGLSYHQLRGILKKYNLLDK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtggccaatcaatttcaacaagacaacctcataggtcagtcgaacgctctactggaagtc
cttgagcacgtttcaaaaattgcacccttatctaagccagtcttaattattggcgagcgc
ggaaccggtaaagagttgatcgccgagcgcctacattatctctccaagcgctgggatcaa
agctttattaagctaaattgttcatccctcagtgaaaatctattagagagcgagctcttt
ggccacgatgccggtgccttcaccggcgccaacaagaagcatgaaggacggttcgagcgt
gccgatggtggcactctgtttttagacgagctcgccaacacctctgggttgatccaagag
aagctgctgcgcgtcatcgaatatggcgagtttgaacgtgtggggggcagcaagacggta
cagacagatgtgcgcctggtgtgcgccgccaacgaagatctgccctcactggccgaagcc
ggcgaatttagggccgacctgctcgaccgcctcgcatttgatgtgatcaccctgccaccg
ctgcgtcatcgcccggaagatattatgcccctggccgaatatttcgccatcggcatggct
cgccagctgaaacagccacaatttgacggctttagtcgcaatgccatcgaccaattactg
gattatcactggccaggcaatatccgtgagttgaagaacgtggtcgagcgcgccgtctac
cgtaatacggatctggaagaaccgatcgacagcattatcatagatccctttgcttcccct
tataggccgaccaaccgcgtcaagaccaagtcccgccaggtgcagagtgagccgatcgct
gaacaggagagccctgcgacgcccgctaccgaatcaaggagcgaggctaagggcttagat
atcagcttcccgctggactttaaagagcactgcgagcagcaggagatcatgctgcttaag
aaggcgctggaatcggggcaatacaaccagaagaagacggcggagctgctcgggcttagc
taccatcagctgagaggcatcttaaaaaagtacaacttactggataaataa
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