Shewanella rhizosphaerae: K0I63_14610
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Entry
K0I63_14610 CDS
T09262
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srhs03016
]
K0I63_14610 (truB)
Enzymes [BR:
srhs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K0I63_14610 (truB)
Transfer RNA biogenesis [BR:
srhs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K0I63_14610 (truB)
Prokaryotic type
K0I63_14610 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QYK11977
LinkDB
All DBs
Position
complement(3355088..3356035)
Genome browser
AA seq
315 aa
AA seq
DB search
MARKPRGRLVDGIVLLDKDTGMSSNFALQRVKRIYNAAKAGHTGALDPLATGMLPICLGE
ATKFSQHLLDADKRYLVTAKLGVRTDTSDSDGEVVQTRPINFTEQQLEEALEHFRGETMQ
VPSMYSALKYQGQPLYKYAREGKEVPREARPINVFELNFIKLEGDELTLDIHCSKGTYIR
TITDDLGEMLGCGAHVIMLRRTGVAGYPYDKMVTLEQLEALLTKAQEEERPPKELLDPLL
LPMDTAVSGLKEINVSDELAHYLMNGNPVQVANLPVDELVRITLGEAKQFVGIGQMNDDG
LLAPKRLVVLHDEQA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaaacctagaggtcgcttggtcgacggcatagtgctgctggacaaagacacg
ggaatgagctccaacttcgccttacagagagtaaagcgaatctacaacgccgctaaggcg
ggtcataccggcgcgctggaccctctagcgaccggcatgctaccgatctgcctgggtgag
gccaccaagttttcgcagcatctgctcgatgccgataaacgttacttggtgaccgccaag
ctaggtgtgcgcactgataccagcgactcagacggtgaggtggtgcagacgcgcccgatt
aacttcaccgagcagcaactcgaagaggcgctggagcattttcgtggtgagaccatgcag
gtgccctcaatgtactcggcgctcaagtatcagggccagcccctgtacaagtacgccaga
gaaggcaaagaggtgccgcgcgaggcgcgtccaattaacgtcttcgaacttaactttatt
aagcttgagggtgacgagctgaccctggacatccactgctccaaggggacttatatccgc
accattaccgatgatctcggtgagatgctgggatgtggtgctcacgtcatcatgctgcgc
cgcacaggagtcgccggttatccttacgataagatggtgacgctggagcagctcgaggcc
ttgctaaccaaggcgcaggaagaggagcgtccgcctaaggagctgctggatcctttgttg
ctgcccatggataccgcggtgagcgggctcaaagagatcaatgtctctgacgagctggcc
cattatctgatgaacggtaatccggttcaggtggctaatttgcccgtcgatgagttggtg
cgtatcaccctaggtgaggcgaaacagtttgttggtattggccagatgaacgacgatggc
ttgctggcgcctaagcgcctggtggtattgcacgacgagcaggcttga
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