Shewanella rhizosphaerae: K0I63_15215
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Entry
K0I63_15215 CDS
T09262
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs00550
Peptidoglycan biosynthesis
srhs01100
Metabolic pathways
srhs01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0I63_15215 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I63_15215 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srhs01011
]
K0I63_15215 (mrdA)
Enzymes [BR:
srhs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K0I63_15215 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
srhs01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K0I63_15215 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
EFG_C
Motif
Other DBs
NCBI-ProteinID:
QYK12083
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Position
3481271..3483154
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AA seq
627 aa
AA seq
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MAPRKRMAMHDHAAEASLFKRRAIFTFGCVIILLSILLGNLYHLQVLSYKDYETRSNDNR
IRVVPVAPSRGLIYDRHGQLLAENQPFYSLELIPEKVKDIPATLDELAKVVELSKDDRES
LVASLKYHRRFKPITVKNRLSEEEVAVFSVNQHRFPGFSIDAGLKRHYPYDGLLTHVLGY
VGRINNRDQAALQRNGQWQNYAATKDIGKQGIEKFYESLLHGMPGHLEEEVNNRGRTIRT
LKSVAPEPGQDIYLTLDLQLQKKAMELLAGRRGSIVAIDPRDGGILAMVSSPSYDPNQFV
HGISSKAYSDLLNARSRPLINRATQGQYAPASTVKPHMALLGLEEKVVTPKTRVWDPGFW
QIPGVERKYRDWKRWGHGWVDVNGALVHSCDTYFYDMAYKTGIDKISNFMQQFGFGERTG
VDIFEESAGNMPSKDWKRLKYNQPWYIGDTISVGIGQGYWTTTPLQLANATAIMANKGER
FVPHLLKSIKNDTVKVDTPVDKMAPVVLKSPHNWQIINEAMRDTAHKSRFVDAGYTAAMK
TGTAQVFSVAEDEKYDAENIDEHLRDNALIVAYAPYEAPRIVLAVVLENAGWGGANAGPV
ARALLDEYMLRDNLPLETAGSPHNERP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
ttggcgccacgtaaacggatggccatgcatgatcatgcagccgaagcctcgctgttcaaa
cgccgcgccatcttcacctttggttgtgtgataatcctactgagcatactgctgggcaac
ctctatcatctacaagtcttgtcctacaaagactacgagacccgctccaacgacaaccgc
atccgtgtcgtgccagtggcgccaagccgcggcctgatctacgacagacacggccaactg
ttggcggagaatcagcccttctactcgctggaactgatccccgagaaggtcaaagacatt
cccgcgaccctggatgaactcgccaaggtcgtcgagctcagcaaggatgacagagaaagc
ctggtcgcctccctcaaataccatcgccgcttcaagccgataacggtcaagaaccgcctg
tcggaggaggaagtggcggtctttagcgtgaaccaacacagattccctggcttctccatc
gacgcgggcctgaaacgccactacccctacgatgggctgctgacccatgtgctgggttat
gtgggccgcatcaacaaccgagatcaggccgcattgcagcgcaacggccagtggcaaaac
tacgccgccaccaaggatatcggcaagcaggggatcgaaaagttttatgagagcctgctg
cacggcatgccgggtcatctcgaagaagaggtcaacaatcgcggccgcaccattcgcacc
cttaaatctgtggcgccagagccgggccaggacatctacctgaccctggatcttcagctg
cagaagaaggcgatggaactgctggcgggtcgtcgcggctcaatcgtggctatcgatccc
cgcgacggtggcatactggccatggtctccagccccagctatgacccgaaccagttcgtg
cacggcatcagctccaaggcctatagcgatctgctcaacgcccgctcacgccctttgatc
aaccgcgctactcaggggcagtacgccccggcatcgacggtgaagcctcacatggcgctg
ctgggcctggaagaaaaggtagtgacccctaagacccgggtgtgggacccaggcttttgg
cagatccccggtgtcgagcgcaagtatcgcgactggaaacgttggggccacggctgggtc
gatgtcaacggcgccctggtgcactcctgtgacacctacttctacgacatggcctacaag
acaggcatagataagatcagcaacttcatgcagcagttcggctttggcgagcgcaccggc
gtggacatcttcgaggaatcggccggtaacatgccatccaaggactggaagcgcctcaaa
tataatcagccctggtatatcggcgataccatctcggtggggatcggccagggttactgg
accacaacacccctgcagctggccaacgccaccgccatcatggccaataagggcgaacgt
ttcgtgccgcacctgctgaagtcgatcaaaaatgataccgtcaaggtcgacacgccggta
gataagatggcgcccgtggtgcttaagagtccacacaactggcagatcatcaacgaggcg
atgagagataccgcccataagtcgcgcttcgtcgacgccggctataccgcggcgatgaag
acgggtaccgcccaggtcttcagtgtagccgaagatgaaaagtatgacgccgaaaatatc
gacgaacacctgagggacaacgccttgatcgtcgcctacgccccctatgaggcgccgcgt
atcgtgctggcagtggtactggaaaacgccggttggggtggcgccaacgcaggccccgtg
gcccgcgccctgctggatgagtatatgcttcgcgacaacctgcccttagaaaccgccggg
agcccacacaatgaacgcccatag
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