Shewanella rhizosphaerae: K0I63_15345
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Entry
K0I63_15345 CDS
T09262
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srhs03021
]
K0I63_15345
Transcription machinery [BR:
srhs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K0I63_15345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
Motif
Other DBs
NCBI-ProteinID:
QYK12104
LinkDB
All DBs
Position
3512329..3512901
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AA seq
190 aa
AA seq
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MSNRYCSLTGKTDLSALTSPDDAHQLLDAVLVQRAKQGDKTAFRQLYDQHHRRVYALCFR
LAGQTELAEEATQETFVRLWQKLPLFDGKSQFTTWLHSLTVNQALSCIKKHKSFWARFMP
SEETHAAAIDFDYQGVDKLLLRLPERARIVFVLYALEGYQHDEIAKRLNIAPGTSKAQYH
RAKKLLQEMI
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataggtattgttcactcacagggaagacagatttgagcgcactcacgagtcca
gatgatgctcaccagctcctcgatgccgtattggtgcagcgcgccaagcagggagacaag
acggcatttcgacaactctacgatcagcatcacagacgcgtctacgccctctgttttcgt
ttggccggccagaccgagctggcagaagaagccacccaggaaacctttgtgcgcctgtgg
cagaagctgcccctgttcgatggcaagagccaatttaccacctggctccacagcctgacg
gtgaatcaggcgctgagctgtatcaagaagcataagagcttctgggccaggtttatgccg
agcgaagagacccatgcagccgccatcgacttcgactatcagggggtggacaagttgctg
ctgcgtctgccggagcgcgcccgtatcgtcttcgtcctctacgccctggagggatatcag
catgacgagatcgccaagcgcctcaatattgcccccggcaccagcaaggcgcagtaccac
agggccaagaaattactgcaggagatgatctaa
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