Shewanella rhizosphaerae: K0I63_15760
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Entry
K0I63_15760 CDS
T09262
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srhs03009
]
K0I63_15760
Ribosome biogenesis [BR:
srhs03009
]
Prokaryotic type
ribosomal protein modification factors
K0I63_15760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
DUF1127
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
QYK12182
LinkDB
All DBs
Position
complement(3610902..3613088)
Genome browser
AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
ARDISTDNIRLSQNNIVDPEDRYNQIFQIQVELPDDISDKDREGILRSIDRCTVKKVVQT
GPEFKIETVENLDADANAMLMGQPEDDSSTYILGKDLPLEQTIANMTEILAGLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGASKESALCSALGEFIERLNCNFFYNDQFFGLD
IANSDFVHYPNEKWFALTDDDSLPEGMLDEYSLEIYNPDGELCGSHLIDTNSGNIERGIC
TIPYKRRSDGETVYFPSNLIENLFLSNGMSAGNNLQEAEVQCLSEIFERAVKRQIIEQEI
VLPDVPMAVLEKYPSILAGIKGLEEQGFPVVVRDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSNKADYEFCEWDFSGSNEEEAKGLFGILESLGKEVYVAEFEELGASACRILVPDYSEVY
PVDDLIWDNTNKALDYREDILNLHRLSDDELADLVNRLEESQLDNYMDIRTLIGIVFDEN
TVWGQLTIIELKILIYLALGAHEEALELVEDFLQFNDNTVQRGLFYQAMSAVLEVTLDEE
LELEHFIGNFTRMFGEDVMAQVVGSVNGEVRFSGLTETSMALEGIEPHLRLIESYKKLHQ
ARKIKAGL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgataacctcagactcgaagccaagttcgacgatttt
accgtcaccgccgatcagcccattcgctacaagggtgatggctcggcgcctagccccttt
gattatttcctggcgtcgtcggccctgtgcgcggcctatttcgtaaaggtttactgtaag
gcgcgcgatatctcgaccgataatattcgtctgtctcagaacaatatcgttgatccggaa
gatcgctataaccagatcttccagatccaggttgagctgcccgacgatatctcggacaaa
gatcgcgaggggatcctgcgctccatcgaccgttgtaccgtgaagaaggtggtgcagaca
ggcccagaatttaagattgagacggtagaaaacctggacgccgatgccaacgccatgttg
atgggccagcctgaagacgacagcagcacctatattctgggtaaagatctgccgcttgag
cagactatcgccaacatgacggagatcctggccggactcgggatgaagatagagatctcc
tcctggcgtaacatagtgcctaacgtctggtcgctgcatattcgtgatgcggcctcgccc
atgtgcttcaccaatggtaagggcgcgagcaaggagagcgccctctgttcggcgctgggc
gagtttatcgagcgtctgaactgtaacttcttttacaacgatcagttctttggcctggat
atcgccaatagtgattttgtgcactacccgaacgagaagtggtttgccctgaccgatgac
gactcgctgcctgaaggcatgctggacgaatacagcctggagatctataacccggatggc
gagctttgcggctcgcatctgatcgataccaactcgggcaatatcgagcgtggcatctgc
accattccttacaagcgccgctcggacggtgagacagtttatttcccatcgaatctgatt
gagaacctgttcttaagtaacggcatgagtgcgggcaacaacctgcaggaggctgaggta
cagtgtttgtcggagattttcgagcgtgcggtgaagcgtcagatcatcgagcaggagata
gtgctacccgacgtgcctatggccgtgctggagaagtaccctagcattcttgccggtatc
aagggactcgaggagcaaggcttcccggtagtagtgagagatgcctccctgggcggtcaa
ttccccgtgatgtgtgtgaccctgatgaaccctaagacaggcggcgtgttcgcctccttc
ggtgcgcacccaagcttcgaggtggcactggagcgcagcctgaccgagcttttgcagggc
cgcagcttcgagggactcaacgatgtgcctaagccgaccttcaacagcatggcggtgagc
gagccggaaaacttcgtcgagcacttcatcgactcgaccggggtgatctcatggcgcttc
ttcagcaacaaggcggactatgagttctgcgagtgggacttctccggcagcaacgaggag
gaggccaaggggctgttcggcatcctggaaagcctgggcaaggaggtctatgtcgccgag
tttgaagagcttggcgcgtctgcctgtcgcatcctggtgccagattactctgaggtttat
ccggtggacgacctcatctgggacaacaccaacaaggcgctggactatcgtgaagatatc
ctcaacctgcacagactgagcgatgatgaacttgccgatctggtcaatcgtctggaagag
agtcagctggataactacatggatatccgcaccctgatcggtatcgttttcgacgaaaac
accgtctggggacagctaaccattatcgagctgaagatcctcatctatctggccctgggc
gctcacgaagaggcgcttgagctggtggaagacttcctgcagttcaacgacaacacggtt
cagcgcggtctcttctaccaggcgatgagcgcggtgctcgaggtgactctggatgaagag
ctcgagcttgaacacttcatcggtaactttacccgcatgtttggtgaagatgtgatggct
caggtggttggttcggtgaacggcgaggtgcgtttctcaggccttaccgagaccagcatg
gcgcttgaaggcatagagccgcatctgcgtctcatcgagagctacaagaagctgcatcag
gcccgtaaaattaaagccggactttaa
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