Shewanella rhizosphaerae: K0I63_16150
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Entry
K0I63_16150 CDS
T09262
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs00550
Peptidoglycan biosynthesis
srhs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0I63_16150 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
srhs01003
]
K0I63_16150 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srhs01011
]
K0I63_16150 (mrcB)
Enzymes [BR:
srhs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
K0I63_16150 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K0I63_16150 (mrcB)
Glycosyltransferases [BR:
srhs01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
K0I63_16150 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
srhs01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
K0I63_16150 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QYK12257
LinkDB
All DBs
Position
complement(3707177..3709546)
Genome browser
AA seq
789 aa
AA seq
DB search
MTNKETPTPRRPRKSTNSKAGNSQTPKRKSASKSAATARPGWGRRIWSLSWKLGLILFAA
MTIYSIYLDQIIARKFEGQKWHLPAQVFSRSMALYPGAAVSHDQLIAELKLLGYRKVANP
RQVGEFSASKTKVDLWRRPFLHPQGSQEAQRVMISFDSQGVASVARSSDHRELAVFHLEP
VLLDRMITGDGEDRLFVATDKIPKAIVDALILVEDRSFYEHHGVNPFAIIRAAMVNISAG
RTVQGGSTLTQQLAKNFFLSSERSIIRKLREALMAIIIDFRYDKDEILEAYLNEVYMGQD
KSRAVHGMGLASQFYFGRPIAELTLPQQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRL
LMESGQLPVAQYKAAVESPLGVRKASKPVHQKLPAFFAVVRGELSRRFGDSLLQQSGIKV
YTTLDPLAQEAAEQAVRSTMKSLEQRDKALQVGMVVTDKYSAGIAAMVGDKVPSYQGFNR
AVEIRRPIGSLIKPFVYATALTHGDKYTLATPLKDEPITLTNSQGKTWSPQNVNKQFSGE
VPLMTAFKKSMNVPTVNLGMAIGTDAVATTLAKSGWDETIPEYPSMLLGAVNGSPLMVAQ
VYQTLADNGRYRQLSAVTHVLDADNQPLSASQRGADQAISVASDFLVQHAMTQVVQSGTA
TKLGQAFPGVTLAGKTGTSNDSRDSWFAGFDERNVAAVWVGLDDNGKTSLYGSSGAMAVY
QAFLKQRAPISLRRTPVNGVVSGYFDAKTGVAKQGNCGNVVAVPALAESYHPAKNCGEPL
SWWQKLMGG
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgacgaataaagagacgccaacaccacgcagaccgcgcaagtcgactaatagtaaggcg
ggcaatagccaaacgcctaagcgtaagtcggcgagtaagagtgcagcgacagcgaggccg
ggttggggccgcaggatctggtctttgagctggaagctcggcctgatcctgtttgctgcc
atgaccatctacagtatctatctggatcagatcatcgcccgcaagtttgaggggcagaag
tggcacctgccggcgcaggtatttagccgctccatggctctctatcccggagcggccgtg
agccacgatcagctgattgccgagcttaagctgctgggttatcgcaaggtggccaatccc
cgtcaggtgggcgagttttccgcctccaagaccaaggtggatctctggcgccgtcccttc
ctccatcctcagggatcccaggaagctcagcgggtgatgatcagcttcgacagccagggg
gttgcctcggtggcccgcagcagcgaccatcgcgagctggcggtgttccacctggagccc
gtgctgctggatcgcatgatcaccggcgatggcgaagacaggctgttcgtggccacagac
aagattcccaaggcgatcgtcgatgcgctgatcctggtggaagacaggagcttctatgaa
catcacggcgtgaatccctttgccatcattcgcgccgccatggtcaacatcagcgccggg
cgcaccgtgcaaggtggctcgaccctgacccagcagctggcgaaaaacttcttcctctcc
agcgagcgctccatcatacgtaagctcagggaagccctgatggcgatcattatcgatttt
cgctacgacaaggatgagatcctcgaggcctacctcaacgaggtctacatgggccaggac
aagtcccgcgccgtgcacggcatggggctggcgtctcagttctatttcggccgaccgatc
gccgagctgaccctgccgcagcaggcctttctggtggcggcgatcaaggggccttcctac
tacaacccttggcgtttccccgagcgggctcaggagcgacgggatctggtgctgcgcctc
ttgatggagtcgggccagctgccggtggcgcaatacaaggcggcggtcgaatcccccctt
ggggtgcgtaaggcgagcaagcctgtgcatcagaaactgccggccttcttcgccgtggtg
cgcggcgagctgtcgcgtcgattcggtgacagcctgcttcagcagtcgggcatcaaggtc
tacaccaccttagaccccctggcccaagaggcggcggagcaggcggtgcgctcgaccatg
aaaagcctggagcagcgtgacaaggcgctgcaagtgggcatggtggtcaccgacaagtat
tcggcgggtatcgccgccatggtgggcgacaaggtgccaagctatcagggctttaaccgc
gcggtggagatccgccgtcctatcggttcgcttatcaagccctttgtctatgctacggcg
ctgacccacggtgacaagtacaccctggcgacgccgctgaaggatgagccgatcaccctg
accaactcccagggcaagacctggtcgccacagaacgtcaacaagcagttctctggtgag
gtaccgttgatgaccgcctttaagaagtcgatgaacgtgccgacggtgaacctcggtatg
gcgataggcacagatgcggtggcgaccacactggccaagtcgggctgggacgagaccatt
ccagagtatccgtccatgttgctgggggccgtcaatggctcaccgctgatggtggcgcag
gtgtaccagaccctggctgacaatggacgctaccgccagctgagtgcggtgacccatgtg
ctggacgccgataatcagccgctgtcggccagtcagcgcggcgcggatcaggcgatctct
gtggccagcgacttcctggtgcaacacgccatgactcaggtggtgcagtcgggcacggcg
actaagctgggccaggccttcccgggcgtgaccctggcgggtaagacgggtaccagtaac
gattcccgcgactcctggtttgccgggttcgatgagcgaaacgttgccgccgtctgggtg
gggctggacgataacggcaagaccagtctctatggcagcagcggcgctatggccgtctac
caggctttcctcaagcagcgcgcgcctataagcctgagacgcacgccggttaatggtgtt
gtgtctggctatttcgatgccaagacgggtgtcgccaaacagggcaactgcggcaacgtg
gtggcggttcctgccctggctgagagctatcacccggcgaagaactgcggcgagccactc
tcctggtggcagaagctaatgggcggttaa
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