Shewanella rhizosphaerae: K0I63_16535
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Entry
K0I63_16535 CDS
T09262
Name
(GenBank) PAS domain S-box protein
Organism
srhs
Shewanella rhizosphaerae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_3
PAS_9
MCP-like_PDC_1
HATPase_c
PAS
PAS_4
HisKA
PAS_8
dCache_1
Hpt
Diguanyl_cycl_sensor
PDE8A_N
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QYK15008
LinkDB
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Position
complement(3812881..3818187)
Genome browser
AA seq
1768 aa
AA seq
DB search
MDMSRLRTFRSRIIVQIALPLIAIMAMVLSLIAWFNYRAEESYLYGDLEKQAEMVASRVH
HFLSFAEKDTRTFADLLGQMSRDQLVQQDGELKALLTRRLERQSDFYASAIAFRPSLTPN
QQLYAPYVYRDQDGVKFLDIGADSYDYTDGQWAWWSEAIDKPQGYWSLPYFDEGAGNILM
ITFSQPFGPSSPYWGVVTVDLALDALPAMAGIDADRMLVLDDKGRLIYHKDAQLLMSQGT
DKWLAASNDNGDFITLLQSAKSGNSRMLAADGQAYLASVGVVPKLNWRVVIMTQEDKLSH
QLYMGLSSLVLTLLLISAVLYLTGYLTARRLSLPIERLAAGIVAFGAGKTKHIEGTRGAV
TEVETLTDKFNELAEVLAQREQALLDSRGNRFAKLIDGMSDKSFYCSLEPDGQIAQVSAG
VEKVLGVSPDLLKRKYQRMFSDNPINEANWEYMDSALQGNSVPPHQVEMIAANGSVRRLD
LFMQPLLADNGELLSIEMLFNDVTEQFSAAAWSNAVLESAPEAMLIVDEQGQVVFSNSRC
QQLFGYDAKQMLALNVDQLVPDSVTHHEALRAKYIGEGVDRRMGLGLGKTLKAKKADGSL
FPVEISLGLLPADSDGLRQVAASIRDMTEELATAKRIKDSESRFRGLVGNIPGAVYRTRL
GEQWVMEYVSDNIAEITGYPAADFIENKKRVFASLILEADREATDTAINKGIAEQQSFEV
QYRIQHRDGSLRWVHEKGKASYDDEGNPLWFDGSIQDVTQSKLAQEKIAQSQQQLETITE
SIPNTVYQLRWIANDQRYFTFLSRACITTLGFHRDQLLANFDLVADCIIESERARIIRAL
SGESASGLKWIEEFRYQHPTGEQRWLQAGARGDRQEDGSIVWNGYLMDISERKQMDRELA
KREAHFRALFDNAGIGIVNVDDRGVILDCNEQFSQYLQLPIERLKGSIFFDYQDPEQGLE
AKNSFKHLMSDGADSVKLEIRLLNQAGEARWMDVNMTGLSDKQGEYRSAVLSMADISSLK
LLSEELTQAKDVADAASKAKSDFLANMSHEIRTPMNAIIGMSQLCLQTSLDKKQQNYVEK
IDRASKSLLGIINDILDFSKIEAGKLDIEAVPFQLDTMLEDLSDMFSVKAADKQLELLFA
VAPNIPRHLVGDPLRLSQVLINLMNNAIKFTEQGEVMLSISQLVREDEEILLKFSVRDNG
IGLTEEQRGKLFQSFSQADSSTTRKYGGTGLGLAICKQLVELMGGEIGVESQFGNGSTFF
FSVRFKVADNQLIKVAHELEGMRILVADDNATARDILRSTLESMGFTVDTVRSGAEALSR
CQETDYGVALIDWRMPEMDGLETARRLLSERANPPKTLIVSAHADGDFIDKAEQAGISGY
ITKPISASRLLDGIMSALGKQGAMPVRRKGSEVSPALLAQLKGKRILLVEDNEMNQEVAS
EFLEQVGVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMDGYQATAELRKRPELADLPV
IAMTANAMAGDKEMCLRAGMNDHIAKPIEVSLLYKTLLEYLGDDSQVIEETSTEQTHQHS
QDAYWPQHPALDIDKGLQLVQNSARLYRRIFERFYTGQSRCAELIATAQREGKQEEAVRY
AHTLKGVAGNLCCPELVTLAKQVEQTLSDSIQADVTEALTQMGELLDSLCTTIGDWLSQT
GAETLPQEDGAEPGATADAPAMSAQELDAAIKELLKMLEEADAEAVEKLQAIRDLLPTSL
ANKIAPVLNMVNAYQFDEAIELVEEIFS
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atggacatgagcagacttcgtacctttcgtagccggataatcgtacagatagccttaccc
cttatcgccatcatggccatggtgttgagtctgatcgcctggtttaactaccgggccgaa
gagagctacctctatggcgatctcgagaagcaggccgagatggtggccagccgggtgcat
cattttctctccttcgccgagaaggatacccgtacctttgccgatctcttaggccagatg
agtcgcgatcagctggtccagcaagatggcgagctcaaggcattgctgacccggcgcctg
gagcgccagagcgatttctatgcaagcgccatcgcttttcgccccagcctgacacctaat
caacagctctacgccccctatgtctaccgggatcaggacggggtgaagttcctggatatc
ggcgccgacagctatgactacaccgacggccaatgggcctggtggagcgaggcgatagac
aagccccagggctactggtcgctgccctatttcgacgagggcgccggtaacatcttgatg
atcaccttctcccagcccttcggcccctcgagtccctattggggcgtggtgactgtggat
ctggccctggacgccctgccagctatggcggggatcgatgccgatcgcatgctggtattg
gatgacaaggggcggctgatctaccacaaggatgcgcagctgctgatgtctcagggcacg
gataagtggctcgccgcatcaaatgacaacggcgacttcatcaccctactccagtcggcc
aaatccgggaacagccgcatgctggccgccgatggtcaggcctatctcgccagcgtaggc
gtggtgcctaagctcaactggcgggtggtgatcatgacccaggaggacaagctctcccat
cagctctacatggggctctcctccctggtgctgactctgctgctaatatccgccgtgctc
tatctaacgggatatctcaccgccagacgcctgtcactgcccatcgagcgcctggccgcc
ggcatagtggccttcggcgccggtaagaccaaacatatcgaaggcactcggggcgcggtg
accgaggtggagaccctaacggacaagtttaacgagctggccgaggtgctggcccagcgc
gagcaagcgctgctggattcacgcggtaaccgtttcgccaagctgatcgatggcatgagt
gacaagtccttctactgctcgctggagcccgatggtcagatcgcccaggtttctgccggg
gtcgagaaggtgctgggggtcagcccggatctgctcaagcgtaagtatcagcggatgttt
tccgacaaccccatcaacgaggcgaactgggagtacatggacagtgccctgcagggtaat
agtgtaccgccccatcaggtggaaatgatcgccgccaacggcagcgtgcgccgcctggat
ctcttcatgcagccgctgctggcggacaacggcgagctgctctccatcgagatgctgttt
aacgatgtgaccgaacagttctcggcggcggcctggtctaacgccgtgctggaatcggcc
cccgaggctatgttgatcgtcgacgagcagggccaagtcgtcttcagcaacagtcgttgc
caacagctgtttggctatgatgccaagcagatgctggcgctgaatgtcgaccagctggtg
cccgatagcgtcacgcatcatgaggccctaagagccaagtatatcggcgaaggggtggat
cgtcgcatgggcctggggctgggtaagacgctcaaggccaagaaggccgacggcagcctg
tttccggtggagatcagcctggggctgctacccgccgacagcgacggtctgcgccaggtg
gcggcctcgatacgggacatgacagaagagttggccaccgccaagcggatcaaggacagc
gagagtcgtttccgaggcctggtgggcaacattcccggcgccgtctaccgcacccgatta
ggcgagcagtgggtgatggagtatgtcagcgacaacatcgccgagatcaccggctatccc
gccgccgactttatcgagaacaagaagcgggtctttgccagcctgatcctggaggcggac
agggaagccaccgacacggcgatcaacaaggggatcgccgagcagcagagcttcgaggtg
caatatcgtattcagcacagggatggcagcctgcgctgggtgcacgagaagggcaaggcc
agctatgacgatgagggtaaccccctctggttcgatggcagcatacaggatgttacccag
agcaaactggcccaggagaagattgcccagtcccaacagcagctggagacgatcacagag
tcgatccccaacaccgtctatcagctgcgctggatagccaacgatcagcgctacttcacc
ttcctctcccgcgcctgcatcactaccctgggctttcaccgggatcagctgctggcgaac
ttcgacttggtggccgactgcatcatagagtcggagcgggcccgcatcattcgcgccctc
tccggcgagagcgcctctgggctcaagtggatcgaagagtttcgctatcagcaccccacg
ggcgagcagcgctggctacaggcgggggccaggggcgatcgtcaggaagatggcagcata
gtctggaacggttacctgatggatatcagcgagcgcaagcagatggacagagagctggcc
aagcgcgaggcgcacttcagggcgctgttcgataacgcgggtatcggcatagtcaatgtc
gacgatcgcggcgttatcttagattgcaacgagcagttcagccaatacctgcagctgccg
atcgagcgtctcaagggcagtatcttcttcgattatcaggaccctgagcaggggctcgag
gccaagaacagctttaaacacctgatgagcgacggcgccgacagcgtcaagttggagatc
cgcctgctcaaccaggctggcgaggccaggtggatggatgtcaacatgacgggcctgtcc
gacaagcagggggaatatcgctccgccgtgctctccatggcggatatcagctccctcaag
ctgctctccgaggagctgacccaggccaaggatgtggccgacgccgccagcaaggccaag
agcgacttcttggcgaacatgtcccacgagatccgcacgccgatgaacgcaattatcggc
atgtcgcagctgtgtctgcagactagtttggataagaagcagcagaactatgtggagaag
atcgaccgcgcctccaagtcgctgctggggatcatcaatgacatcctggacttctccaag
atagaggcgggcaagctggatatcgaggctgtgcctttccagctcgacaccatgctggaa
gatctcagcgacatgttttcggtcaaggccgccgacaagcagctcgagttgctgtttgcc
gtggcgcccaatattccccgccatctggtgggggatccgctgcgactcagccaggtgttg
atcaatttgatgaacaacgccatcaagtttaccgagcagggcgaggtgatgctgtcgatc
agtcagctggtgcgtgaggatgaggagatactactcaagttcagcgtgcgcgataacggc
ataggcctcaccgaggagcagcgcggcaagctgttccaatctttcagtcaggccgacagt
tccaccacccgcaagtatggcggcacaggtctggggctggcgatctgcaagcagctggtg
gaactcatgggcggcgagatcggcgtcgagagtcagttcggcaacggcagcaccttcttc
ttcagcgtgcgcttcaaggtcgccgacaatcagttgatcaaggtggcccacgagctggaa
gggatgcggattctggtcgccgacgacaacgccaccgcccgggatattctgcgcagcact
ctcgaaagcatgggctttaccgtcgatacggtgcgcagcggcgccgaggcgctgagtcgc
tgtcaggagaccgactatggggtggcgctgatcgattggcgcatgcctgagatggacggc
ctggagacggcgcggcgactgctgagcgagcgcgctaacccgcccaagacgctgatcgtc
tcggcccatgccgacggtgattttatcgacaaggcggagcaggcggggatctcgggctat
atcactaagccgatcagcgcctcacgcctgctggacggcatcatgtcggccctgggtaag
caaggtgccatgccggtgcggcgtaagggcagcgaggtaagccccgccctgctggcgcag
cttaagggcaagcgcatcctgctggtggaagacaacgagatgaaccaggaagtggccagt
gagttcctcgagcaggtgggggtgatcctttcgattgccgagaatggtcaggtggcgctg
gagaagctggccatgcagagcttcgacttggtgctgatggattgtcagatgccggtaatg
gatggctatcaggccaccgccgagctgcgtaagcgtcccgagttggcagatttgccggtg
atcgccatgacggccaacgccatggcgggcgataaggagatgtgcctgcgcgccggcatg
aatgaccatatcgccaagcctattgaggtgtcgctgctctacaagacgctgctggaatac
ctgggggatgacagtcaggtcatagaggagaccagcactgagcagacacatcagcacagt
caggatgcctattggccacagcacccggcgctggacatcgacaaggggctgcagctggtg
cagaactcggcgcgtctctaccggcggatattcgagcgtttctatacgggtcagtcccgc
tgcgccgagcttatcgccactgcccagcgtgagggtaagcaggaggaggcggtgcgttac
gcccacaccctcaagggggtggccggtaacctctgctgccctgagctggtgaccctggct
aagcaggtggagcagacactcagcgattcgatccaggccgatgtgactgaggcgctgact
cagatgggcgagctgttagacagcctgtgcaccaccataggtgactggctcagtcagacc
ggggccgagacgctgccgcaagaagatggcgccgagcccggggcgactgccgatgcgcct
gccatgtcagcccaggagctggacgccgcgattaaggagctgctcaagatgctggaggag
gcggacgccgaggcggtggagaagctgcaggcgatccgcgatcttctgccaacctcgctg
gccaacaagatagcgcccgtgctcaacatggtgaatgcctatcagtttgacgaggcgatc
gagctggtggaggagatctttagctag
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integrated database retrieval system
