Shewanella rhizosphaerae: K0I63_17250
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Entry
K0I63_17250 CDS
T09262
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_17250
Transporters [BR:
srhs02000
]
Other transporters
Pores ion channels [TC:
1
]
K0I63_17250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QYK12463
LinkDB
All DBs
Position
3981171..3983228
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AA seq
685 aa
AA seq
DB search
MALRLSFLTLSIGTALLTLPFAQAQEAAFEIIEVHGAHQGSYTSVTPEAQAPVSDISGLL
TQLPGTAVNGNGPLTGIAQYRGLFGDRVNTQVNGVSLAGAGPNAMDTPLSYASLINSERI
EMHRGIAPVSAGTNTVGGSIKVIESQASFNDTQGRIAAQYQGNGDQSHLGAKVNVGGKNH
ALLVYGDLMHGDEDMKSGGDLRLSPTGYDKQIIGGQYRFNLSDKGLDDESIAIGYQHLET
TEAGTPALPMDIDFIRTDRVKVEGEHRLDTWELNWHLAYSDARHGMDNFSERQKPESANA
RYNNAESQSYDMALTLGRDAWLFGLDSQLSEHNSLITDPTKPMFRVDNFNKVQDDTYSAF
AQWQQDIDQWHWQLGARVKHYRTDADEVSHSMAGAMPAIKVLMDRYNQADRTQAQTGLDL
VINGRYRVNEELTWILGLARKQDSASYQQRYLWIPMQSTGGLADGRTYVGKMDLDLETAY
QLELGADFNRQGLSISPRVFLHRIDDYIQGVKSTDPAVIMAANMMGSQDPMEFANVDAQL
LGMDINASYEITDQWQLDLLASYVSGERRDIDDNLYRIAPPKVNLGLNFREGNWSARIEG
VMVAAQDKVSESQSEQASAGYGLVNLVLAYDRQNWLVKAGVNNLFDIDYEDHLGGYNRVF
NADLAPGQRMPGTGMNAWLTGEYRF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgtctctctttccttacgctctcaatcggcacagccttgctgacccttccc
tttgcccaggctcaagaagccgctttcgaaatcatcgaagtccatggtgcccatcagggt
agctatacctctgtgacgccagaagctcaggcgcccgtcagtgacatcagcggcctgctc
acccagctcccaggcacggccgtcaatggtaatgggccgctgaccggcatcgcccagtat
cgcggcctgttcggcgacagagtcaacactcaggtcaatggcgtctccctcgccggcgcc
ggccccaacgccatggacactccgctgagctatgccagcctgatcaacagcgagcgcatc
gagatgcaccgcggaatagcccctgtctcggccggcactaacacagtgggcggcagcatc
aaggtgatcgagtcccaggccagctttaacgatactcagggtcgcatcgccgcccagtat
caaggcaatggcgaccaaagccatctgggagccaaggtcaatgtgggcggcaagaaccac
gccctgctggtctatggtgacctcatgcatggagatgaggatatgaaatccggcggcgat
cttcgcctctctcccaccggctacgacaagcagatcatcggcggccaataccgcttcaac
ctcagcgacaaggggctggacgatgagtccatcgccatcggctaccaacacctggaaacc
actgaggcgggcactccggcgttgcctatggatatcgacttcatccgtaccgacagggta
aaagtggaaggtgaacacaggctcgacacctgggagctcaactggcatctggcctatagc
gatgccagacacggcatggacaacttcagcgaacgtcagaagcccgagagtgccaacgcc
cgttacaacaacgccgagagccagagttatgatatggcgctgacactgggcagagatgcc
tggctgtttggcctcgacagtcagctgagtgagcacaactcactgatcacagatcccacc
aagcccatgttcagggtcgacaactttaacaaggtgcaggacgatacctatagcgccttc
gcccaatggcaacaggatatcgaccagtggcattggcagctcggtgccagggtgaaacac
taccgcaccgatgccgatgaggtcagccactcaatggctggcgccatgcctgccatcaag
gtgttgatggacagatataaccaggcggatcgcacccaggctcaaacggggctggatctg
gtgatcaacggccgttatcgcgtcaatgaggagttaacctggatactcgggctggcccga
aaacaggacagcgccagctatcagcagagatacctatggatcccgatgcaatcgaccggt
ggactcgccgacggtcgcacctatgtgggcaagatggatctcgatctggaaaccgcctat
cagctagagctgggcgccgacttcaaccgccagggactaagcatcagcccacgagtcttc
ctgcatcgcatcgacgactatattcagggggtgaagtcgaccgatcccgcggtgatcatg
gctgccaacatgatgggcagccaagatccgatggaatttgccaatgtcgatgcccagcta
ctagggatggatattaacgccagctatgagatcacagaccagtggcagctggatctcctg
gccagctatgtcagcggcgagcgccgcgacatcgacgacaacctctaccgtatagcgcca
cctaaggtgaatctggggctcaacttcagagaaggcaactggtctgcccgcatcgaaggg
gtgatggtggcggctcaggacaaggtatcagagagtcaatccgagcaggcaagcgccggc
tacggcctggtcaacctggtactggcctacgacagacaaaactggctggttaaggctggg
gtcaacaacctgttcgatatcgactatgaagatcatctcggcggctacaaccgggtattc
aatgccgacctggcaccgggtcaacgcatgccgggcactggcatgaatgcctggctcacc
ggggagtatcgcttctaa
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