Shewanella rhizosphaerae: K0I63_19190
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Entry
K0I63_19190 CDS
T09262
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs00521
Streptomycin biosynthesis
srhs00523
Polyketide sugar unit biosynthesis
srhs00525
Acarbose and validamycin biosynthesis
srhs00541
Biosynthesis of various nucleotide sugars
srhs01100
Metabolic pathways
srhs01110
Biosynthesis of secondary metabolites
srhs01250
Biosynthesis of nucleotide sugars
Module
srhs_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
K0I63_19190 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
K0I63_19190 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
K0I63_19190 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
K0I63_19190 (rfbB)
00525 Acarbose and validamycin biosynthesis
K0I63_19190 (rfbB)
Enzymes [BR:
srhs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
K0I63_19190 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
KR
NAD_binding_10
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
QYK12819
LinkDB
All DBs
Position
4411957..4413027
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AA seq
356 aa
AA seq
DB search
MNSEQHHPLAGRNILITGGAGFIGSALIRHLIALGGCHVVNYDKLTYAGNLASLESVAQE
PNYHFIQADINDGDTLGRALRQYQIDLVIHLAAETHVDRSIAGPRAFIDTNIVGTFELLQ
QCLDYYRKLPTEMAARFRLHHVSTDEVFGDLGSDQAGYFSEQSPYAPSSPYSASKAAADH
LVRAWHRTYGLPVVLSNCSNNYGPYQYPEKLIPVTLLNALQGKSIPVYGDGKQIRDWLYV
DDHAHALCQVAARGEPGESYNIGGMNEMTNLEVVSLICDLLNQKVTEKPSGINDFRQLIG
FVKDRPGHDTRYAIDASKLSRTLGWQPSESFARGLEKTVDWYLTHLDWCHQVASQS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgaacagcatcacccgttagccgggcgcaatatcttgatcacaggcggcgct
ggctttatcggctcggccttgattcgccacctcatcgcgctgggcggttgccacgtagtg
aactatgacaagcttacctatgccggcaatctggcatcgctcgaatccgtagcgcaagaa
cccaactaccatttcatccaggccgatatcaatgatggcgataccctgggcagagcccta
aggcaataccagatagatctggtgatccacctcgcggcggagacccatgtggaccgctct
atcgcggggccgagagcctttatcgacaccaatattgtcggcaccttcgagctgctgcag
caatgcctagactattatcgcaagctgccgacggagatggcggcacgatttcgcctgcac
catgtctcaaccgacgaagtatttggcgacttaggctcagaccaggcgggatactttagc
gagcagtctccctacgcccccagctcaccttattccgccagcaaggccgcggcggatcat
ctggttagggcctggcatcgcacctacggcctaccggtagtgctgtcgaactgctccaac
aactatggcccctatcaatatccggagaagctgatccccgtgaccctacttaacgccctg
cagggaaaatcgattcccgtctatggcgatggcaagcagatccgcgactggctctatgtg
gacgaccacgcccatgccctgtgccaggtggccgctcggggcgagccaggcgagagctac
aacataggcggcatgaatgagatgacgaatctcgaagtcgtcagcctcatctgcgatctg
ttaaatcaaaaggtcaccgagaagcccagcggcatcaacgatttcaggcaactcatcggc
ttcgtcaaagacaggccggggcacgacacccgctacgccattgacgccagcaagctgagc
cgcaccttaggctggcagcctagcgaaagcttcgccagaggcttggagaagacggtggac
tggtatctgacacacctggattggtgccatcaggtggcgagccaatcatga
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