Shewanella rhizosphaerae: K0I63_19380
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Entry
K0I63_19380 CDS
T09262
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srhs03009
]
K0I63_19380 (rsmB)
Enzymes [BR:
srhs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
K0I63_19380 (rsmB)
Ribosome biogenesis [BR:
srhs03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K0I63_19380 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
Methyltransf_37
Methyltransf_5
Methyltransf_11
MTS
Methyltransf_12
FtsJ
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QYK12851
LinkDB
All DBs
Position
4454678..4455961
Genome browser
AA seq
427 aa
AA seq
DB search
MKNLRALAARVVFQVLEKGVSLSVALPEQQQRLTSGKDKALLAELCYGVMRHLPQLDKLV
SDCMSKPLKGKQRIVHQLLLVGCYQLYFTRIPGHAAISETAEACRQLKFEGLVKVVNGVL
RNLQRNQKPLPEDNETLAFNTPAWLIKRLKAAYPDSWQEVIAQSHQRPPMWLRNNQLSQT
REQYLALLDEQEIAATPGANDDAILLDSPKDVGLLPGFADGAASVQDGAAQWAANLLAPE
ANELILDACAAPGGKSCHLLESQPSIDLVAVDFDAKRLERVQQNLDRLSLKAKLVHGDAA
KIDTWWQGDKFDRILLDAPCSATGVIRRHPDIKWLRKQADIEELATLQSQILDHCWQWLK
PGGTLLYATCSILPQENAEQIAAFLARTQDATLVPIAQQQNSDDIGWQITPGQDNMDGFY
YARLVKG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacctgcgagccctcgcggccagagtcgtcttccaggtattagagaaaggggtc
tcactgtccgtggccctgcccgaacagcagcaaagacttaccagtgggaaagacaaggcc
ctgttggccgaactctgctatggcgtgatgcgtcacctgccccagctcgataaactggtg
agcgactgcatgagcaagccactcaagggcaagcagcgcatcgtacatcagctgctactc
gtgggatgttatcagctctattttacccgtatccctggccatgcggcgatctcggaaact
gccgaggcctgtcgccagctcaagtttgaggggctggtcaaggtggtcaacggcgtgctg
cgcaacctgcagcgcaaccagaaaccgctgcccgaagacaacgagaccctggcctttaat
accccagcctggttgatcaagcgtctcaaggccgcctatccagatagctggcaagaggtg
atcgcccagagccatcagcgtccgcccatgtggctgcgcaacaaccagttatcccagacc
cgagagcaatatctggcgctactcgacgagcaggagatagcggcgacaccgggtgcgaac
gacgacgccatcctcttagatagcccgaaagatgtcggcctgctcccaggttttgccgat
ggcgccgcctcggtacaagatggcgcggcgcaatgggccgccaacctgttggcgcccgaa
gcaaatgaactgattctcgacgcctgcgccgcccccggcggtaagagctgtcatctgctg
gagagtcagcccagcatagatctggtggcggtagacttcgacgccaagcgtctggagcga
gtgcagcagaacctcgacagattaagcctcaaggccaagctggtgcatggcgacgccgcc
aagatagacacctggtggcagggcgataagttcgatcgcatcctgctggacgcaccctgt
tcggccaccggcgtgatccgccgccacccggacatcaaatggctacgaaagcaggccgat
atcgaagagctagccacattgcagtcacaaattttggatcattgctggcagtggcttaaa
cccggtggcacactcctgtatgctacatgctcaattttaccgcaagagaacgccgagcag
atcgcggctttcttagcgagaacccaagacgcaaccctggttcctatcgcacaacaacaa
aacagcgatgacattggctggcagatcacgccgggccaagacaatatggatgggttttac
tacgctcgcttggttaagggataa
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integrated database retrieval system
