Shewanella rhizosphaerae: K0I63_19810
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Entry
K0I63_19810 CDS
T09262
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
srhs
Shewanella rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_19810
Transporters [BR:
srhs02000
]
Other transporters
Pores ion channels [TC:
1
]
K0I63_19810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Calycin_like
Motif
Other DBs
NCBI-ProteinID:
QYK12931
LinkDB
All DBs
Position
complement(4553058..4555196)
Genome browser
AA seq
712 aa
AA seq
DB search
MSFKLGSFNYSPVGFAVLAALAATPAVADDAESSLVEANIERITVTGRTFNDYKVGVASG
AMRGDIDLMDTPQSVVVIPDFVTDEQLATNLSEVLVNDSSVTSGSEKWNRQVFNIRGFEL
SSGSGYLINGQQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLINMVTKKPTYDTLF
ELGFDTDEHGSTRFQLDAGGSLNEAQTIRYRTVLVKQDTQYWREYQDGSNQERDRWLGYL
NLEFDITDDLMLSLKYDHTQDKTGIDRGGWLNSQGELIGGRDLIWDQPWAFTDNTISNLG
AELTYHLSDDWQVKAGYNDQQFNRQRLDSSPSLVKGSEDPFTDGYTISPFDRYDDWQHKT
GFIDFTGDFSTGDFEHKLLIGANMLDYYYGQLKEAGDKNQLVMPGQPVPRPDLDYHRDTT
KSESDYKHYGFYIQDLMTINQQWQLLAGVRYDEQKKDGKGNNSYAVSPKFGVIYSPAENG
SIYFNYSKSFTPQGMVNDPDDVNDQMNLDPEYGEQFEVGTKWELFDGSLLLTGALFDITV
SNVTVTQDLEVIPTSGDKTITTQSGEQRHKGFEMGAQGQLSDKWFMTGSMMYLDAEYQRP
QEDRLNGKTPVDAPEWSANIWTRYEMTEALALNFGAIYVGERFANTDNTITKDAYVRFDI
GAAYTMDVMGSDVSVRLNVKNLFDTDYLAGGTNTDVTVGEGRHFGLALQAKF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaagctaggttcgtttaactattctcctgtcggtttcgccgtgctggccgcc
ttggcggcgacgccagcagtggccgatgatgccgaaagcagcctggttgaggcaaatatc
gaacgtattaccgtgacggggcgaacctttaacgactataaggtgggcgttgcttccggc
gccatgcgtggtgatatcgatcttatggatacgccgcaatctgtggtggtgatccccgac
tttgtgaccgacgagcagttggcgaccaacctgtcggaggttctggtaaacgactcgagt
gtcaccagcggcagcgagaagtggaatcgtcaggtgtttaacatccgcggtttcgagctg
tcatcgggttcgggttatctgatcaatggtcagcagcagtggtctcactatgtgcagcct
atcgagaccctgcaacaggtagaggtgttaaagggaccctctagcatgctctatggccag
tctggcccaggcggcctgatcaacatggtcactaagaagcctacctatgacaccctgttt
gagctgggcttcgacaccgacgagcatggatcgacccgatttcagctggatgccggtgga
agcctgaacgaggcgcagaccatacgctaccgcacagtgctggttaagcaagacactcaa
tattggcgtgaatatcaggacggcagcaatcaggagcgggatcgctggttgggctacctg
aaccttgagttcgatatcacagacgatctcatgctgtcgctcaagtatgaccacactcag
gataagacgggcatagaccgtggtggctggctcaatagtcaaggcgagctgatcggtggc
cgcgatctcatctgggatcagccctgggcctttaccgacaacaccatctcaaacttgggt
gccgagctaacctatcatctcagcgacgactggcaggtgaaggcgggttataacgaccag
cagtttaatcggcagcgtttagattcttcacctagcctggtaaagggctcggaagatccc
ttcaccgatggctacaccattagcccgttcgaccgttatgacgactggcaacacaagacg
ggcttcatcgactttaccggcgactttagcaccggtgacttcgagcacaagttgttgatc
ggcgccaatatgctggactactactatggccagctaaaggaggcgggagataagaaccag
ttggtgatgccggggcagcctgttcctcgtccggatttggattatcatcgcgataccacc
aagtctgagtccgactataagcattatggcttctatattcaggatctgatgaccatcaac
cagcaatggcagttgttggctggcgtacgctacgatgagcagaagaaggatggtaagggc
aacaacagctatgcggtatcgcctaagtttggggtgatctactcgccagccgaaaatggc
agcatctacttcaactactctaagagcttcacgccccaggggatggtgaatgatccggat
gatgtgaacgatcagatgaatctggatcctgagtatggcgagcagtttgaggtcggtacc
aagtgggaactgttcgatggcagcctgctgctaaccggcgccctgttcgatattacggta
tccaatgttaccgtgacccaagatctcgaggtgatccctaccagtggtgataagacgatc
accactcaatccggtgaacagcgtcataaaggcttcgagatgggggctcaagggcagctg
agcgacaagtggttcatgacaggatctatgatgtatctcgatgccgagtatcaacgcccg
caagaagacagactcaacggcaagacgcctgtagacgcacccgagtggtcggccaacatc
tggacccgttacgagatgacagaggccttagcgcttaactttggtgccatctatgtgggt
gagcgtttcgccaatacggataacaccatcaccaaggatgcctatgtgcgtttcgatatc
ggcgccgcctataccatggatgtgatggggagcgatgtcagtgtacgtctcaatgtgaag
aacctgttcgataccgattacctagccggtggtaccaatacggatgttaccgtgggtgag
ggacgtcatttcggcttagcgctgcaagccaagttctaa
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