Serratia rhizosphaerae: FO014_04100
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Entry
FO014_04100 CDS
T07504
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
srhz
Serratia rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhz03400
]
FO014_04100 (phrB)
Enzymes [BR:
srhz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FO014_04100 (phrB)
DNA repair and recombination proteins [BR:
srhz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FO014_04100 (phrB)
Prokaryotic type
FO014_04100 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CON_HrpB
Motif
Other DBs
NCBI-ProteinID:
QHA86222
UniProt:
A0ABX6GIX4
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All DBs
Position
complement(859567..861000)
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AA seq
477 aa
AA seq
DB search
MTTHLVWLRNDLRITDNKALHAACSDPQAQVVALFIATPQQWRQHEMAPRQAAFIYANLL
PLQSQLAQRGIPLVVHQCDDFADSVRWLTDYCRTTGVDALFYNRQYELNERRRDRQVETA
LADTLTCHAFDDALLLPPGSVQTGKGEMYQVYTPFRKAFLQRLYSADVRSLPAPAVRASG
AISPPAPPVPFVDPDAAWDAAAFPPGEEHALRRLRTFCLEQVQDYRQQRDFPALDATSGL
SPYLAIGVLSPRQCVNRLRLTCPDLLEQPDGGAFTWLNELVWREFYRHLLVAYPALCRHR
PFIGWTEAVRWNPDAGALQAWQQGRTGYPIVDAAMRQLNNTGWMHNRLRMIVASFLVKDL
LIDWRAGERYFMRQLLDGDFAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGAFI
RKWLPELADVPDNELHHPHRWAEKQGIALAYPPPIVDHRQARLTTLAAFEAAKRGGD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatttggtctggctgcgcaatgatttgcgcatcacggacaacaaggcattg
cacgccgcctgcagcgatccgcaggcgcaggtggtggcgctgtttatcgccacgccgcaa
cagtggcggcagcacgagatggcgccgcggcaggcggcctttatttacgccaacctgctg
ccgctacagtcgcagctggcgcagcgcggtattccgctggtggtgcatcagtgcgatgat
tttgccgactcggtgcgctggcttacggactattgccgcaccaccggcgtcgatgcgctg
ttttacaaccggcagtatgaactgaatgagcggcggcgtgaccggcaggttgaaaccgcg
ctggcggatacgctgacctgtcacgcgtttgatgacgcgctgttgctgccgccgggcagc
gtgcagaccggcaaaggcgagatgtatcaggtctatacgccgtttcgtaaggcgtttttg
cagcgtctgtacagcgccgatgtacgctccctgccggcgccagcggtgcgtgcgagcggt
gcgatttcgccgccggcgccgccggttccgtttgttgatcctgatgccgcatgggatgcg
gcggcattcccgccgggtgaggaacacgccttgcgccggctgcgcactttttgcctcgag
caggtgcaggactaccggcagcagcgcgactttccggcgctggacgccaccagcggcctg
tcgccgtatctggcgataggcgtgttatcgccgcgtcagtgcgtcaatcgcctgcggctg
acctgccctgacctgctggagcagccggacggcggcgcgtttacctggctgaatgagtta
gtctggcgtgaattttaccgccatctgctggtggcttatccggccctgtgccgccatcgc
ccctttatcggctggacggaggccgttcgctggaatccggacgccggggcgctacaggcc
tggcagcaggggcgcaccggctacccgattgtcgatgcggccatgcggcaactgaataac
accggatggatgcataaccgtttacggatgatcgtggccagttttttggtgaaggatctg
ctgatcgactggcgagccggcgagcgctattttatgcgccagctgctggatggcgatttc
gccgccaataacggcggctggcagtgggcggcgtcgaccggtaccgacgcggcgccttat
tttcgcatctttaatccgacgacgcagggcgaacgttttgatccgcaaggcgcttttatc
cgtaaatggttgcccgaactggcggatgtaccggacaatgaacttcatcatccccaccgt
tgggcggaaaagcagggtattgcgctggcgtatccgccgccgatcgtcgaccaccgccag
gcgcggctgacgacgctggcggcgtttgaggcggcgaaacgcggaggggattaa
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