Serratia rhizosphaerae: FO014_04365
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Entry
FO014_04365 CDS
T07504
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
srhz
Serratia rhizosphaerae
Pathway
srhz00550
Peptidoglycan biosynthesis
srhz01100
Metabolic pathways
srhz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FO014_04365
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FO014_04365
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srhz01011
]
FO014_04365
Enzymes [BR:
srhz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FO014_04365
Peptidoglycan biosynthesis and degradation proteins [BR:
srhz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FO014_04365
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QHA86265
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Position
912679..914574
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AA seq
631 aa
AA seq
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MKIERNPFRDYSAESALFVRRALVAFLVILVLSCILIANMYNLQIVRFEDYRTRSNENRI
KLVPIPPSRGIIYDRNGTPLALNRTIYQLELMPEKVDNLEATLQALRPVVDLTDDDIANF
RKERKRSRRFVSIPVKTALTEVQVARFAVNQFRFPGVEVKGYQRRYYPYGSALTHVIGYV
SKINDRDVARLNKEEKLANYAATHDIGKLGIERYYEDTLHGKTGYEEVEVNNRGRVIRQL
HEQQPSAGQDIYLTLDLNLQRYIEQLLVGSRAAVVVSDPRTGAILAMVSNPSYDPNMFVD
GISNKEYQGLLNDPNRPLINRATQGVYPPASTVKPYIAVSALSAGVVTKNTIVFDPGWWQ
LPGSEKRYRDWKKWGHGRLNVTKALEESADTYFYQVAYDMGIDRLSSWLTKFGYGQYTGV
DLSEERSGLMPTREWKLKRYKKPWYQGDTIPVGIGQGYWTATPLQMSKALNILINDGVIK
TPHLLHSKKINGSLVPFRQEAQAPIGDIHSGFWEIAKDGMYGVANRANGTARKFFAGTPY
KAAAKSGTAQVFGYETYNAHKLAEHLRDHKLMTAFAPYDNPTVSVAIILENGGAGPAVGT
ITRQILDHILLGDNNTQLPDTPPAAPGSEGD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagaacgtaacccttttcgcgactattcggctgaatcagccctgtttgtacgc
cgcgccctagtggcgtttttggtcattctggtgctgagctgcatcctgattgccaatatg
tataatttacaaattgtccgctttgaggattaccgcacccgctctaacgaaaaccgcatc
aaactggtgcccatcccgcccagccgcggcattatttacgatcgcaacggtacgccgctg
gcgctcaaccgcaccatctatcagcttgagctgatgccggaaaaagtcgataacctggag
gccacgctgcaggcgctgcgcccggtggtcgatctgaccgatgacgatatcgccaacttt
agaaaagagcgtaagcgctcgcgccgcttcgtctctatcccggtgaaaaccgcgctgacc
gaagtgcaggtcgcacgctttgccgtcaaccagttccgtttccccggcgttgaagtcaaa
ggctaccagcgccgttactacccttacggttcggccctgacccacgttatcggttatgta
tcgaaaatcaacgaccgcgacgtcgcgcgcctgaacaaagaagaaaagctggccaactat
gccgccacccacgatatcggcaagctgggcatcgaacgctattatgaagatacgctgcac
ggtaaaaccggctatgaagaggtcgaggtcaataaccgcggccgggtgatccgccagttg
catgaacagcagccttccgccggccaggatatttacctgacgctggatctcaacctgcag
cgctatatcgaacaactgctggtcggcagccgcgccgccgtggtggtcagcgacccgcgt
accggcgcaattctggcgatggtgtccaacccaagctacgacccgaacatgtttgtcgac
ggcatttccaataaagagtatcagggtttactgaatgacccgaaccggccgctgatcaac
cgcgccacgcagggcgtctatccgccggcttcgacggtaaaaccctatatcgccgtatcg
gcactgagcgccggcgtcgtcaccaaaaacaccattgtgttcgatcccggctggtggcag
cttcccggttcggaaaaacgctaccgcgactggaaaaagtgggggcacggccgtctgaac
gtcaccaaggcgctggaagagtccgccgatacctatttctatcaggtggcttatgatatg
ggcattgaccgcctgtccagctggctgacaaaattcggctacggccaatatactggcgtc
gatctgtccgaagagcgctccggcctgatgccgacccgcgaatggaaactcaaacgctat
aaaaaaccatggtatcagggcgacaccatcccggtaggcattggtcaggggtactggacc
gcaacgccgctgcagatgtcaaaggcgctgaatatcctgatcaacgacggagtaataaaa
acgccgcacctgctgcacagtaaaaaaataaatggttcactggtgcctttccgtcaggaa
gctcaggcaccaatcggagatatccactccggcttctgggaaattgccaaagacggtatg
tacggggtcgccaatcgcgccaacggcacggcgcgcaagttttttgccggcaccccctat
aaagccgcggcgaaatcgggtaccgcacaggtattcggttacgaaacctataacgcccac
aaacttgcggaacatctgcgcgaccataagctgatgaccgcgttcgccccttatgacaac
ccgacggtgtcggtggcgatcatcctggaaaacggcggcgccggcccggcggtcggcacc
ataacccgccagatcctcgatcatatcctgctgggtgacaacaatacgcaattaccggac
acgccgccggcggcgcccggctcagaaggtgactaa
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