Serratia rhizosphaerae: FO014_05075
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Entry
FO014_05075 CDS
T07504
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
srhz
Serratia rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhz03400
]
FO014_05075 (sbcC)
DNA repair and recombination proteins [BR:
srhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FO014_05075 (sbcC)
Archaeal homologous recombinant proteins
FO014_05075 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
cobW
AAA_21
nSTAND3
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QHA86399
UniProt:
A0A857EAL4
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All DBs
Position
1062660..1065914
Genome browser
AA seq
1084 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFSAEPFASNGLFAITGPTGAGKTTLLDAVCLALYHQTPR
LHVSPSQNDLMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNDPNGNLQAPKVELALLTD
GKILADKVRDKLEAVAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGQLSERVFEQHKQAKLELDALHQRASGIELLSDEQRQQLETQLDALRQEETTLSQHDEQ
QRQTLNWLQQWQRLQQQLQQCQQRLQALQQEQEQAEPQLQTLARSEPAEKLRPLHNERQR
YRDELQASQQQLTRLDQQQQQQAAQMAPLQQALEQARAEQQTQAAHRQQQQQLIDEQVLP
LDHHIAQLSKSRSELQQTRDDAVRQCGQQKQTLDKLHAERAQLATQAEQHQTQLSALTQA
LAAQQQQHSVLEAETPLAALRQRLQQLSDLRPTRQQLATLSSLALQLDQRLTQQRQELAA
GQQQLQQLAPQLEQARQQYQQHKTLQAEVEKTHELEQRIVSLEAERARLQTGSPCPLCGS
TEHPAITDYQTLNPSASARRLDELRQQGEALYKNGVELRARHDGMQQQQQRQQQAIEQDE
QQLAAHQQRWQTLTAELAFDFGLQESERLQQWLSDCDHEEREGQQRLSQHEQAAQAVQQA
KDALIALQNAQQQAQQQTALLNERLTLLEKQYADAQQQQQRLQQQWQDNEEQIAAQQRQR
LALFGEQPVAQAREQLRAKQAACELASQQAAERWQLAQEQRERLNGQLAGLQQQLAQQTQ
RAEQAQQQWQKALSASEFADDAAFHAALLDDAQRQHLQQLKEQQQQRQVETRALLAQAEQ
AREQHQQQRPQGVDDQHADLAALAQQQQALAQQLKTLQLRQGELRNQLTSDTERRGNQQA
LFAQIAQSQRQYDDWSCLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLSRLHGRYLLQ
RKNSDALELLVVDTWQADAQRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQY
RIEG
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgagcctacggctgaaaaacctcaactcgctgcagggcgagtggaaaata
gacttcagcgccgaaccgttcgccagcaacggcctgttcgccatcaccggcccgaccggc
gcgggcaaaaccaccctgctcgacgccgtctgcctggcgctgtatcaccagacgccgcgg
ctgcacgtatcccccagccagaacgatctgatgacgcgccataccgccgaatcgctggcc
gaggtggagttcgaggtcaaaggcgtcggctaccgcgccttctggagccagcgccgggcc
aaaaacgatccgaacggcaacctgcaggcgccgaaggtcgagctggcgctgctgacggac
ggcaagatcctcgccgataaggtgcgcgacaagctggaggcggtcgccgccatcaccggc
ctggacttcggccgttttaccaaatcgatgatgctgtcgcaggggcagttcgccgccttc
ctcaacgccgacgccaacgatcgcgccgaactgcttgaagaactcaccggcaccgaaatc
tacggccagctgtccgagcgggtgttcgaacagcataagcaggccaaacttgagctggat
gcgctgcaccagcgcgccagcggtattgaactgctgagcgacgaacagcgccaacagttg
gaaacccagctcgacgcgctgcgtcaggaagaaaccacgctcagtcagcacgatgaacaa
cagcggcagacgcttaactggctgcaacagtggcagcgtctgcagcaacagctgcaacag
tgccagcagcgcttacaggcgctgcaacaggagcaggagcaggccgaaccgcagctgcag
acgctggcgcgcagcgaacccgccgaaaaactgcgcccgctgcacaatgaacgccagcgc
taccgcgatgaactgcaggcatcgcagcagcagctgacccggcttgaccaacagcaacag
cagcaggccgcacaaatggcaccgctgcagcaggcgctggagcaggcgcgcgccgaacaa
cagacacaggcggcgcaccggcaacagcagcagcagctgatcgacgaacaggtgctgccg
ctcgatcaccacatcgcacagctgagcaaaagtcgtagcgaactgcagcaaacccgcgac
gacgccgtgcgccagtgcggacagcagaaacagacgctggacaaactgcacgccgaacgc
gcacagctggcgacgcaggccgagcagcatcagacgcagctgagcgccctgactcaggcg
ctcgccgcacaacagcagcagcacagcgtgctggaagccgaaacgccgctggccgccttg
cgccagcgcctgcagcagctgagcgacctgcgcccgacgcgccagcagctggcgaccctg
tcctcgctggcgctgcagctggatcaacggctgacgcaacagcggcaggagttggccgcc
ggccagcaacagctgcaacagctggcgccgcagttagaacaggccagacagcagtatcag
cagcacaaaaccctgcaggcggaagtagagaaaacccatgagcttgagcagcgcattgtc
agtctggaagccgaacgcgcccggctgcagaccggctcgccctgcccgctgtgcggctct
accgagcacccggccatcaccgattatcagacgcttaacccgtcagccagcgcccggcgc
cttgacgagctgcgccagcagggcgaagcgctgtataaaaacggcgtcgagctgcgcgcc
cgtcacgacggtatgcagcaacagcaacagcgtcagcagcaggcgattgagcaggatgaa
cagcaactggcggcccaccagcaacggtggcagaccctgaccgccgagctggcgtttgat
ttcggcctgcaggagagcgagcgcctgcagcagtggctgagcgactgcgaccacgaagag
cgcgagggccagcagcgcctcagccaacatgagcaggcggcgcaggcggtacaacaggcc
aaagatgcgctgatcgcgttgcagaacgcacagcagcaggcgcagcagcagacagcgctg
ctgaatgaacgcctgacgctgctggaaaaacagtatgccgacgctcagcagcagcagcag
cgtctgcagcagcagtggcaggacaacgaggagcagatcgccgcccagcaacggcagcgc
ctggcgctgtttggcgagcagccggtggcgcaggcgcgcgaacagctgcgcgccaaacag
gcggcctgcgaactggccagccagcaggctgccgaacgctggcagctggcgcaggaacag
cgtgaacgcctgaacggccagctggcggggctgcagcagcagctggcgcagcaaacgcag
cgcgccgagcaggcgcagcagcagtggcagaaggcgctgagcgccagtgaatttgccgat
gacgccgccttccacgccgccctgctggacgatgcgcagcgtcagcatctgcaacagctg
aaagagcagcagcaacagcgtcaggtggaaacccgcgcgctgctggcgcaggccgaacag
gcgcgcgagcagcaccagcagcagcgcccgcaaggtgtggatgaccaacatgccgatctc
gcggcgctggcacagcagcagcaggcgctggcgcagcagttgaagacgctgcagctgcgt
cagggcgagctgcgcaaccagctgaccagcgacaccgagcgtcgcggcaatcagcaggcg
ctgttcgcgcaaattgcccagagtcagcggcagtatgacgactggagctgcctcaaccag
ctgatcggctcaaaagaaggcgataaattccgtaaattcgcccaagggctgacgctcgat
catctggtctatctggcgaacaaccagctcagccgcctgcacggccgctatctgctgcag
cggaaaaacagcgatgcgctggaactgctggtagtggacacctggcaggccgacgcgcag
cgcgacacccgcacgctgtccggcggcgaaagttttctggtcagtctggcgctggcgctg
gcgctgtccgatctggtcagtcacaaaaccagcatcgattcgctgttcctggacgaaggc
ttcggcacgctggatgccgagacgctggataccgcgctggacgcgctcgacagccttaac
gcctccggcaagaccatcggcgtgatcagccacgtcgaggcgatgaaagagcggatcccg
gtgcagatcaaagtgaaaaaggtcaacggcctggggatcagccggctggagccgcagtac
cgcatcgaaggctaa
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integrated database retrieval system
