Serratia rhizosphaerae: FO014_08980
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Entry
FO014_08980 CDS
T07504
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
srhz
Serratia rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srhz03021
]
FO014_08980 (rpoH)
Transcription machinery [BR:
srhz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FO014_08980 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_3
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QHA87069
LinkDB
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Position
complement(1890698..1891555)
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AA seq
285 aa
AA seq
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MTKEMQTLALVPQGSLEAYVRAANAYPMLTAEEERELAERLHYQGDLDAAKQLILSHLRF
VAHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVSSKDVREMESRMAAQDM
TFDPTPDDEARDGQSMAPVLYLQDKTSDFAEGIEEDNWESNAADKLAYALEGLDERSQHI
IRARWLDDENKSTLQELADRYGVSAERVRQLEKNAMKKLKMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagccttagtaccccaaggcagcttggaagcctatgtt
cgggccgccaacgcctatccgatgcttacggcagaggaagagcgggagctggctgaacgg
ctgcattaccagggcgatttggatgcggccaagcagctgatcctgtctcacctgcgcttt
gtcgctcatattgcccgtaattactcgggttacggcctgccgcaggcggacctgatccag
gaaggtaatatcggcctgatgaaagctgtgcgccgttttaatccggaagttggcgtgcgt
ctggtttcctttgcggtgcattggatcaaggcagaaattcacgaatacgtactgcgtaac
tggcgtatcgtcaaagtcgctactaccaaggcgcagcgcaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggttcaaccaggacgaagtcgagctggtggcgcgtgag
ctgggcgtatccagcaaagacgtgcgcgagatggaatcccgcatggcggcgcaggacatg
accttcgacccgacgccggacgacgaagcgcgcgacggccagtcgatggcgccggtgctg
tacctgcaggacaaaacgtctgacttcgccgaaggtatcgaagaagacaactgggagagc
aacgccgccgacaagctggcctatgcgctggaaggtctggatgagcgtagccaacatatt
attcgcgcccgctggctggacgatgagaacaagtccaccctgcaggaactggccgaccgc
tacggcgtttccgccgagcgtgtgcgtcagttggaaaagaacgccatgaaaaaactgaaa
atggcgatcgaagcataa
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