Serratia rhizosphaerae: FO014_09110
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Entry
FO014_09110 CDS
T07504
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
srhz
Serratia rhizosphaerae
Pathway
srhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FO014_09110 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srhz03019
]
FO014_09110 (recQ)
03400 DNA repair and recombination proteins [BR:
srhz03400
]
FO014_09110 (recQ)
Enzymes [BR:
srhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FO014_09110 (recQ)
Messenger RNA biogenesis [BR:
srhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FO014_09110 (recQ)
DNA repair and recombination proteins [BR:
srhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FO014_09110 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
MrpR_C_cat
Motif
Other DBs
NCBI-ProteinID:
QHA87092
UniProt:
A0ABX6GLG6
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All DBs
Position
complement(1918230..1920062)
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AA seq
610 aa
AA seq
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MSTAAVINSELLAEQVLRDTFGYQQFRPGQQTIIDAATRGQDCLVVMPTGGGKSLCYQIP
ALMLEGLTLVVSPLISLMKDQVDQLLANGVAAACYNSTQTREQQLEVMAGCRSGAIKMLY
IAPERLMMDSFLSLLDSCPPAMLAVDEAHCISQWGHDFRPEYSALGQLKQRFPAMPVVAL
TATADETTRNDISRLLALQDPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNARRAQVQEAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCLEEKPAGQQ
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGKQQACGNCDICLDPPKRYDGLEDARKAL
SAIGRVGQRFGIGYVVEVLRGSNNQRIREFGHDKLPVYGIGRDHTTEHWISVLRQLIHLG
FITQNVAMHSALQLTEAARPVLRGEVELQLAVPRIQSLKARGGAAQKSYGGNYDRKLFAK
LRKLRKSIADEENIPPYVVFNDSTLLEMAEQMPIRASELLSVNGVGQRKLERFGAPFMAM
IRDHMDNDED
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaccgcagcagtgataaacagcgaattgctggcagagcaggtgttacgcgacacc
tttggctatcaacaattccgtccgggacaacaaacgattatcgacgcggcgacccgcggc
caagactgcctggtggtgatgccgaccggcggcggcaaatcgttgtgctatcaaatcccg
gcgctgatgctggagggactgaccctggtggtctccccgctgatctccctgatgaaggat
caggtggatcaactgctggccaacggcgtggcggcggcctgctacaactcgacgcaaacg
cgcgaacagcagttggaagtgatggccggttgccgcagcggcgcgattaaaatgctgtat
atcgcccctgaacgcctgatgatggacagcttcctgtcgctgctcgacagctgcccgccg
gcgatgctggcggtggacgaggcgcactgtatttcccagtggggccacgatttccggccg
gaatacagcgcgcttggccagctgaagcagcgcttcccggcgatgccggtggtcgcgctg
acggcgaccgctgacgagaccacgcgcaatgacatttcgcgcctgctggcgctgcaggat
ccgctgattcaggtcagcagcttcgaccggccgaacatccgttatacgctggtggagaag
tttaaaccgctcgatcagctgtggcgctttgtgcaggaccagcgcggtaaaagcggcatt
atctactgcaacagccgcgccaaggtggaagacaccgccgcccgtctgcagagccgcggc
ctgagcgtgggggcataccacgccggcctcgacaacgcgcggcgcgcacaggtgcaggaa
gccttccagcgcgacgatctgcaggtggtggtggccacggtggcgttcggcatggggatc
aacaagcccaacgttcgtttcgtggtgcacttcgatattccgcgcaacattgagtcctac
tatcaggaaaccggccgcgccggccgtgacggcctgccggcggaggcgattctgctgtat
gacccggccgatatggcctggctgcgccgctgtctggaggagaagcccgccgggcagcag
ttggatatcgagcgtcataagctcaacgccatgggcgcctttgctgaagcgcaaacctgc
cggcgtctggtgctgctcaactactttggcgaaggcaaacaacaggcctgcggcaactgc
gatatctgcctcgacccgccgaagcgctatgacgggctggaggacgcgcgcaaggcgctg
tcggcgattggccgcgtcggccagcgtttcggtatcggctacgtggtggaagtgctgcgc
ggctccaataatcagcgcatccgcgagttcggccacgacaaactgcctgtatacggcatc
ggtcgcgatcacaccaccgaacattggatcagcgtgctgcgccagctgatccatctgggc
tttattacccagaacgtcgccatgcactcggcgctgcagctgactgaagccgcacgtccg
gtactgcgcggcgaagtggagctgcagctggcggtgccgcgtattcagagcctgaaggcg
cgcggcggcgcggcgcagaaatcctacggcggcaactacgaccgcaaactgttcgccaag
ctgcgcaagctgcgtaaatcgatcgccgatgaagaaaatattccgccgtacgtggtgttt
aacgactcgacgctgctggaaatggcggaacagatgccgatccgggccagcgaactgctg
agcgtcaacggcgtcggccagcgtaaacttgaacgtttcggcgcgccgtttatggcgatg
atccgcgaccatatggataacgatgaggattaa
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