Serratia rhizosphaerae: FO014_09310
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Entry
FO014_09310 CDS
T07504
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
srhz
Serratia rhizosphaerae
Pathway
srhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FO014_09310 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srhz03019
]
FO014_09310 (rhlB)
Enzymes [BR:
srhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FO014_09310 (rhlB)
Messenger RNA biogenesis [BR:
srhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FO014_09310 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHA87126
UniProt:
A0ABX6GLH8
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All DBs
Position
1955815..1957104
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AA seq
429 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPLVLEALEKKGFHNCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLTSTFHYLLSHPAKQDRQTNQPRALIMAPTRELAVQIHADAEMLSQSTGLKLGLAYG
GDGYDKQLKVLEKGVDILIGTTGRLIDYAKQNYIDLSAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPSADQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIVFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTKGSLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIEAYTGHSIPVSKYNSDALLDDLPAPKRLSRPRGGNNSRRNSSQRRSGGA
PRNNRKRSG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttgactgaacagaagttttccgacttcgccctgcacccgttagtc
cttgaagcccttgaaaaaaaagggtttcacaactgcacgcctatccaggcgttggcatta
ccgctcacgctctccgggcgtgacgttgcaggtcaggcgcaaaccggtaccggaaagacg
ttggcatttctgacgtctacttttcactatttactctcccacccggcgaaacaggatcgc
cagaccaaccaaccgcgcgccttgatcatggcgcctacgcgcgagctggcggtgcagatc
cacgccgatgcggaaatgctgtcgcagtccaccgggctgaagctgggcctggcctacggc
ggcgacggttatgacaaacagctgaaagtgctggaaaagggcgtagatattctgatcggc
accaccggccgactgattgactacgcaaaacaaaactatatcgacctgagcgccattcag
gtggtggtgctggatgaagccgatcgcatgtacgatctgggctttatcaaagatatccgc
tggctgttccgccgcatgccgtcggccgatcagcgtctgaacatgctgttctccgccacc
ctctcctaccgcgtacgcgagctggcgttcgagcagatgaacaatgccgaatatgtggaa
gtcgaaccggaacagaaaaccggccaccgcatcaaagaagagctgttctacccgtccaac
gaagagaaaatgcgcctgctgcagacgttgatcgaagaagagtggccggatcgcgccatc
gtcttcgccaacaccaagcaccgctgcgaggacatctggggccatctggccgctgacggt
caccgcgtgggcctgctgaccggcgacgtcgcccagaaaaagcgtctgcgcattctggaa
gacttcaccaaaggcagcctggatattctggtggccaccgacgttgcggcgcgcggcctg
catattcctgcggttacccacgtcttcaactacgatctgcctgacgactgcgaggactac
gttcaccgcatcggccgtaccggccgcgccggcgccagcgggcactccatcagcctggcc
tgtgaagaatacgcgcttaacctgccggcgatcgaagcctacaccgggcacagcatcccg
gtcagcaaatacaacagcgacgcactgctggacgatttgccggcgccgaaacgcctgtcg
cgcccgcgcggcggcaacaattcgcgccgtaattcgtcgcaacgccgcagcggcggcgcg
ccgcgcaacaaccgtaaacgttcaggctga
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