Serratia rhizosphaerae: FO014_10255
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Entry
FO014_10255 CDS
T07504
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
srhz
Serratia rhizosphaerae
Pathway
srhz03030
DNA replication
srhz03410
Base excision repair
srhz03420
Nucleotide excision repair
srhz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FO014_10255 (polA)
03410 Base excision repair
FO014_10255 (polA)
03420 Nucleotide excision repair
FO014_10255 (polA)
03440 Homologous recombination
FO014_10255 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srhz03032
]
FO014_10255 (polA)
03400 DNA repair and recombination proteins [BR:
srhz03400
]
FO014_10255 (polA)
Enzymes [BR:
srhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FO014_10255 (polA)
DNA replication proteins [BR:
srhz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FO014_10255 (polA)
DNA repair and recombination proteins [BR:
srhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FO014_10255 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FO014_10255 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Ribosomal_60s
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QHA87295
LinkDB
All DBs
Position
2186379..2189177
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLQQYAPTHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHRMVKAMGLPLLVTPGVEADDVIGT
LALQAEKAGHAVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYANLDSIATLSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELEVSCSELNVLPPDVDQLHQMFKQYEFKRWLADVESGTWLQGK
KGGAKAASAAKSSGAAAETPKAAAEAKLSQDGYVTILDEKTFAEWLERLKKAELFAFDTE
TDGLDTQSANLIGLSFAIEPGIAAYLPVAHDYLDAPEQLDRAYVLETLKPLLEDEKALKV
GQNLKFDKSLLARYDINLRGIAYDTMLESYVLDSVGGRHDMDSLADRYLGHKTVTFEEIA
GKGKNQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPKLKESDGQRKVFSEIEMPLLPVL
SRIERTGVLIDQHILATHSQELTKRLAELETQAHELAEEPFNLASTKQLQAILYEKQKLP
VLKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPQMINPVSGRVHT
SYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPKGYRILAADYSQIELRIMAHL
SQDEGLLKAFAAGEDIHRATAAEVFGVPLDKVTSEQRRSAKAINFGLIYGMSAFGLARQL
GIPRNEAQRYMDLYFERYPGVLDYMERTRQQASEQGFVSTLDGRRLYLPDVRSSNGMRRK
AAERAAINAPMQGTAADIIKRAMIAMDSWLLEQKEPQVRMIMQVHDELVFEVHESVLEEA
SQRIRDLMESSMTLAVPLKVDVGTGNNWEEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgctgaaaaccctttgatcctggtagatggttcctcttacctctatcgt
gcctatcatgccttcccgccgctgaccaactctgccggtgaaccgaccggcgccatgtac
ggcgtgctgaatatgttgcgcagtctgctgcagcagtacgcgccaacccatgtggcggta
gtgttcgatgccaaaggcaaaactttccgcgatgaattgttcgcggagtacaagtcccac
cgcccgccaatgcctgacgatctgcgtgcgcagatcgagcctttacaccgcatggtcaaa
gcgatgggtctgccgctgctggtgacgccgggcgttgaggctgatgatgtcataggcacg
ctggcgctgcaggcggaaaaagccggccatgccgttttgatcagcaccggcgataaagat
atggcgcagctggtcacgccaaacgttacgctgatcaacaccatgaacaacaccattctg
gggccgcaggaagtgtgtgataaatacggcattccgccggaattgatcattgatttcctg
gcgctgatgggcgattcctccgataacatccccggcgtaccgggcgtgggtgagaaaacg
gcacaggcgctgctgcaagggctgggcggtctggatacgctgtatgccaatctggacagc
attgcgaccctgagcttccgcggcgccaaaaccatggccgccaagctggaacagaacaaa
gaggtggcttacctctcctatcagctggcgaccatcaaaaccgatgttgagctggaggtg
agctgcagcgaactgaacgtcttgccgccggatgtcgatcagctgcatcagatgttcaag
cagtatgagttcaaacgttggctggcggacgttgagtccggcacctggctgcagggtaaa
aaaggcggcgccaaggcagccagcgcggcaaaatcatccggcgcagcggcggagacgcca
aaagccgcggcggaagccaaactgtcgcaggatggctatgtcaccatcctggatgaaaaa
acgtttgccgaatggctggaacggctgaaaaaagccgagctgttcgccttcgataccgaa
accgacggcctggatacgcagagtgcgaacctgattggcctgtcgttcgcgattgagccc
ggcattgccgcttatctgccggtggcacatgactatctggatgcgccggagcagctggat
cgcgcttatgtgctggaaacgctaaaaccgttgctggaagatgagaaagcgctgaaagtc
ggccagaatctgaagttcgacaagagcctgctggcgcggtatgacatcaatctgcgcggt
atcgcttatgacaccatgctggaatcctacgttctggacagcgtcggcggccgtcatgat
atggacagcctggccgatcgttatctcggccataaaaccgtcacctttgaagagattgcc
ggcaaaggcaagaatcagctgacattcaatcagattgcattggagcaggcggcaccgtac
gcggcagaagatgcggacgtcactctgcagctgcatttggccatgtggccgaaactgaaa
gagagtgacggccagcgcaaggtgttcagcgagattgaaatgccgttactgccggtgctt
tcccgtatcgagcgtaccggcgtgctgatcgatcagcatattctggcgacccactcacag
gaactgaccaagcggctggccgagctggaaacacaggcgcacgagctggcggaagagccg
tttaacctggcatcgaccaagcagctgcaggcgattttgtatgagaagcaaaaactgccg
gtgttgaaaaagacgccgggaggcgcgccgtcgaccaatgaggaagtgctggccgagctg
gcgctggactacccgctgccaaaagtgattctggaatatcgcggactggcgaagctgaag
tccacctataccgacaagctgccgcagatgatcaatccggtcagcggtcgggtgcacacc
tcgtaccatcaggcggtgaccgctaccggccggctgtcatcaagcgatccgaacctgcag
aacatcccggtgcgtaatgaggaagggcggcgtattcgccaggcgtttatcgcgccgaag
ggataccgcattctggctgccgactactcacagattgagctgcgtattatggcgcatctg
tcgcaggatgaggggctgctgaaagcctttgccgccggtgaggacattcaccgggctacg
gctgccgaggtctttggcgtgccgttggataaggtcaccagtgaacagcgccgtagcgcg
aaggcgatcaacttcggcctgatctacggcatgagcgcctttggtctggcgcgtcagctg
gggatcccgcgtaatgaagcgcagcgctatatggatctctattttgagcgctatcctggc
gtgctggattatatggagcgtacgcgtcagcaggcttccgagcaggggttcgtcagcacg
ctggatggccgccggctctatctgcccgatgtgcgttccagcaacggtatgcgccgtaag
gcagcggagcgtgcggcgatcaatgcgccgatgcagggcaccgcggccgatatcatcaaa
cgcgcgatgattgccatggatagctggctgctggaacagaaggagccgcaggtgcgtatg
atcatgcaggtgcacgatgaactggtgtttgaagtacacgaatcggtgctggaagaagcc
agccagcgcattcgcgatctgatggaaagtagtatgacgctggcggtgccgctaaaagtg
gacgtaggcaccgggaataactgggaagaagcgcattaa
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