Serratia rhizosphaerae: FO014_12910
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Entry
FO014_12910 CDS
T07504
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
srhz
Serratia rhizosphaerae
Pathway
srhz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FO014_12910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhz03400
]
FO014_12910
Enzymes [BR:
srhz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
FO014_12910
DNA repair and recombination proteins [BR:
srhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FO014_12910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QHA87781
LinkDB
All DBs
Position
2739724..2740218
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AA seq
164 aa
AA seq
DB search
MELLAPHLRVVFCGINPGLSSAHRGYPFANASNRFWKVIHLAGFTARQLAPEEWQQLQEY
GCGITALVARPTVAASELAREELRRGGEALSDKILCCQPRALAILGKQAFSDAFGIRKVS
WGRQALMIGDTEVWVLPNPSGLNRATLESLTDSYRQLASSLENR
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atggaacttctggcgccgcatctgcgggtggtgttttgtggcatcaatcccggcctttct
tccgcccaccgcggctatccgtttgccaatgccagcaaccgtttctggaaggtgattcat
ctggcggggtttaccgcccgtcagctggcgccggaggagtggcagcagctgcaggagtac
ggctgcggcattacggcgctggttgcgcgtccgacggtggcggccagcgagctggcgcgt
gaggaactgcgccgcggcggcgaggcgttaagcgataaaattctgtgctgtcagccgcgc
gcgctggcgattctcggcaaacaggcgttcagcgatgccttcggcatccgtaaggtgagc
tgggggcggcaggcgctgatgattggcgatactgaagtgtgggtgctgcccaatcccagc
gggcttaaccgcgcgacgctggagtcgctgacggacagctatcgtcagctggcgtcgtcg
ttggaaaacagataa
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