Serratia rhizosphaerae: FO014_14775
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Entry
FO014_14775 CDS
T07504
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
srhz
Serratia rhizosphaerae
Pathway
srhz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FO014_14775 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srhz03019
]
FO014_14775 (pcnB)
Enzymes [BR:
srhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FO014_14775 (pcnB)
Messenger RNA biogenesis [BR:
srhz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FO014_14775 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QHA89934
LinkDB
All DBs
Position
complement(3144279..3145826)
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AA seq
515 aa
AA seq
DB search
MFTRVANFCRKVLIGDDKSARDDAPANDHEPVRAERADAQKPAAPRPRSDDKGREHAGRR
PAPRKRAPSSAAEGTRPMTVIPREQHAISRKDISENALKVLYRLNKSGFEAYLVGGGVRD
LLLGKKPKDFDITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQNP
EHDKNSSQQAQNGMLLRDNIFGSIEEDAQRRDFTINSLYYGVADFALRDYVGGLRDLQQG
VIRLIGDPETRYREDPVRMLRAVRFAAKLDMTISEETAEPIPRLASLLHDIPPARLFEES
LKLLQSGYGFQTYLKLCEYQLFQPLFPLIARQFTPNHNTPMERILVQVLKNTDHRLQNNM
RVNPAFLFAAMLWYPLLEHAQKLAQESGLAYYDAFALAMNDVLDEQCRSLAIPKRITTLV
RDIWQLQLRLSRRQGKRAHKLMEHPKFRAAYDLLALRAQVENNPEMQRLAEWWAEFQDAT
PARQKTMLSSLGDDPAPRRSRQRRPRRRAPRKEGA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atttttacccgagtagccaatttctgccgtaaggtactcatcggcgacgacaaatcagcc
cgcgatgatgcgccggccaacgatcacgagccggttcgcgcagagcgcgccgacgcccag
aagcctgccgcaccgcgcccgcgctccgacgataaaggccgggagcatgccggccgtcgc
cctgcgccgcgtaaacgcgcgccgtcatccgccgccgagggaacgcgccctatgaccgtg
atcccacgtgagcagcatgcgatttcgcgtaaagatatcagtgaaaacgccctgaaggtg
ctgtaccgcctgaataagtccggctttgaagcctacctggtcggcggcggcgtacgcgat
ttactgctgggtaagaaaccaaaagactttgatatcaccaccaacgccacgccggagcag
gtacgcaagctgttccgcaactgccgtctggtcggccgccgcttccgtctggcgcacgtg
atgttcgggccggaaatcattgaggtcgccacgttccgcggccatcatgagcagaatccg
gagcacgacaagaattcctcccagcaggcccagaacggcatgctgctacgcgacaatatc
ttcggttccattgaggaagatgcccagcgtcgcgacttcaccatcaacagcctgtactac
ggcgtagcggacttcgccctgcgcgactatgtcggcggcctgcgcgatctgcaacagggc
gtgattcgcctgattggcgatccggaaacccgctaccgcgaagacccggtgcgcatgctg
cgcgcggtgcgcttcgccgccaagctggatatgaccatcagcgaagaaaccgccgagccg
attccgcgcctggcgtcgctgctgcacgatattccgccggcgcgcctgtttgaagagtcg
ctgaagctgctgcagtccggctacggcttccagacctacctgaaactgtgcgaataccag
ctgttccagccgctgttcccgctgatcgcccgtcagttcacgccgaaccacaatacgccg
atggagcgtattctggtgcaggtgctgaaaaacaccgaccaccgtctgcagaacaatatg
cgcgtcaacccggcgttcctgttcgccgccatgctgtggtatccgctgctggagcacgcg
cagaaactggcgcaggagagcggcctggcctattacgacgccttcgcgctggcgatgaac
gacgtgctggacgagcagtgccgctcgctggcgatcccgaaacgcatcaccacgctggtg
cgcgatatctggcagctgcagctgcgtctgtcgcgtcgtcagggcaagcgtgcgcacaag
ctgatggaacatccgaaattccgcgccgcttacgatctgctggcgctacgcgcccaggtg
gagaacaacccggagatgcagcgcctggccgaatggtgggccgagttccaggatgcaacg
ccggcgcgacaaaaaaccatgctcagctcgctgggcgacgatcccgcgccgcgccgttca
cgtcagcgccgcccgcgccgccgcgcgccgcgtaaagaaggggcataa
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