Serratia rhizosphaerae: FO014_15550
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Entry
FO014_15550 CDS
T07504
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
srhz
Serratia rhizosphaerae
Pathway
srhz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FO014_15550 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhz03400
]
FO014_15550 (recB)
Enzymes [BR:
srhz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FO014_15550 (recB)
DNA repair and recombination proteins [BR:
srhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FO014_15550 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QHA88262
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All DBs
Position
3313817..3317374
Genome browser
AA seq
1185 aa
AA seq
DB search
MTTLAPQTLDPLTLPLCGERLIEASAGTGKTFTIGALYLRLLLGLGKQAAFSRPLTVEEI
LVVTFTEAATEELRGRIRSNIHGLRIACIRGREHCNNPLFAALMAEIDDLADAAAQLLAA
ERQMDEAAIYTIHGFCQRMLTQNAFESGILFEQTLVQDELPLRRQACADFWRRHCYPLPL
DVARAVSQEWSGPEALLSDLSAYLHGEAPTLRQPPQEDETLLARHQKIVARIEAIKAQWI
AVAADLHDLISSSGVDKRSYSSKHLPNWLHKVGEWAGQETQDYQLPKELEKFRQSTLLEK
TKKGEAPRHALFDAVDGLFAEPLTLRDLLMARALSEIRTSIQQEKRQRAELGFDDLLSRL
DGALQSAGGEHLAQAIRQRYPVAMIDEFQDTDPQQYRIFHKLYVGQAACGLLLIGDPKQA
IYAFRGADIFTYMRARSEVSAHYTLETNWRSSPTMVGSVNRLFSRLEKPFLFGEIPFIDV
AAADKNQKLAFELHNQPQAAMHFWLQPGDGVGVSDYQQQMARLCATQIRDWLTAGQRGEA
WLTDGDKRRPVQASDITILVRSRAEAALVRDALSLLAIPSVYLSNRDSVFDTPEAKDLLW
LLQAVLAPEQERTLRSAMATGLLGLDAPTLDALNHNERAWDALVEEFDQYRTLWLRRGVL
PMLREVMTQRHLAENLLASSGGERRLTDVMHLGELLQEASAQLDSEHALVRWLAQQIAQP
NSQSDNQQLRLESDRHLVQVMTIHKSKGLEYPLVWLPFVGNYRQQQQVLYHDRHSFKALL
DLNADEESIAWAEEERLAEDLRLLYVALTRSVYHCSIGIAPLIQGTRKKQGETDLHRSAL
GYLVQGGQAGDAAYLQGCLQQLADESIALSLLEALDEQPWQPQSMKAEQLAARQVSRQMQ
DFWRVTSYTGLQQHGAGLMQDLLPRLDVDAAGEQTAESEPSLTPHTFPRGAAPGTFLHSL
FETLDFTQPLDPDWLAEQLQLNGYDACWQPVLQTWMETLLQTVLNDSGVTLAQLTPQAKQ
AELQFYLPIGQLLQASQLDALVKQYDPLSARCPALDFQRVQGMLKGFIDLIFCWRGKYYL
LDYKSNWLGEDSSAYTQPAMAQAMAEHRYDLQYQLYTLALHRYLRHRLMDYDYQRHFGGV
IYLFLRGVDGQHPGNGIFACRPEADLVEGMDRLFSGDDTLGESEA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgctggctccgcaaacgctcgatccgttaacgctgccgctctgcggtgaacgg
ctgattgaagcctcggcggggaccggcaagaccttcaccatcggcgcgttgtatctgcgc
ctgctgttggggttgggtaagcaggcggcgttttcccgcccgctgacggtagaggaaatt
ttagtggtgacctttaccgaggccgccaccgaagagctgcgcggccgtattcgcagcaat
attcacgggctgcgcatcgcctgtatccgcgggcgtgagcactgcaacaacccgctgttc
gctgcgttaatggcggagattgacgacctggcggatgcggcggcgcagctgttggccgcg
gagcggcaaatggatgaggcggcgatctataccatccatggcttctgtcaacgtatgctg
acccagaacgcctttgagtccggcattttatttgagcagacgctggtgcaggatgagctg
cctctgcgccggcaggcctgcgctgacttttggcgccgccattgctacccgctgccgctg
gacgttgcgcgcgcggtcagccaggagtggagcgggccggaagctttgctgagcgacctg
tccgcctatctgcacggggaggcgccaacgctgcgccaaccgccgcaggaggatgaaacg
ctgctggcgcgccaccagaagatcgtggcgcgtattgaagccatcaaagcgcaatggatc
gcggtggcggccgatctgcatgaccttatcagcagttccggcgtggataaacgcagctac
agcagcaagcacttgcccaattggctacataaggtcggcgagtgggccgggcaggaaacg
caggattatcaactgccgaaggaactggaaaaattccgccagtcgacgctgctggaaaaa
accaagaagggcgaggcgccgcgtcatgccctgtttgacgccgttgatggtctgtttgcc
gaaccgctgacgctgcgcgacctgctgatggcgcgtgcgctgagtgagatccgcacctcg
attcagcaggaaaagcgtcagcgtgccgaattggggtttgacgacctgctgagccggttg
gacggcgcgctgcagagcgctggcggcgagcatctggcgcaggcgatacgtcagcgttat
ccggtggcgatgattgatgaatttcaggataccgatccgcagcagtaccgcattttccac
aagttatatgtggggcaggcggcgtgcggactgctgttgattggcgatcccaaacaggcg
atttacgcgttccgcggcgcggacattttcacctatatgcgcgcccgctctgaggtgagc
gcccactatacgctggaaaccaactggcgctcttccccgacgatggtcggcagtgtcaac
cggttgttctcccggctggaaaaaccgtttctgttcggcgagatcccgtttattgacgtg
gcggcggcggataagaaccagaaactggcgtttgaactgcataatcagcctcaggccgcc
atgcacttctggctgcagccgggcgatggcgtcggagtaagcgactaccaacagcagatg
gcgcgcctgtgcgcgacgcaaattcgcgactggctgactgcagggcagcgcggagaagcc
tggttgacagatggcgacaagcgccggccggtacaggcgtcggatatcaccattctggta
cgcagccgggcggaagcggcgctggtgcgcgatgcgctcagcctgttggcgattccttcg
gtatacctgtcgaatcgcgacagcgtgtttgatacgccggaagccaaagatttgctgtgg
ctgctgcaggcggtactggcgccggagcaggagcggaccttacgcagcgcgatggcgacc
ggcctgctggggctggatgcgccgacgctggatgcgctgaatcataacgagcgggcgtgg
gacgcgctggttgaagagtttgatcaataccgtacgctgtggctgcggcgcggcgtattg
ccgatgctgcgcgaggtgatgacgcagcggcatctggcagagaacctgctggccagctcc
ggcggcgagcggcgtctgaccgatgtgatgcacctgggggaactgctgcaggaagcgtcg
gcgcagctcgacagcgagcatgcgctggtacgctggctggcgcagcagattgcccagccg
aacagccagtcggacaaccagcagctgcgtctggaaagcgaccgccacctggtgcaggta
atgacgattcacaagtccaaggggctggagtatccgctggtctggctgccgtttgtcggc
aattatcgccagcagcagcaggtgctgtatcacgatcggcacagtttcaaagccctgctg
gatttgaatgccgatgaagaaagcatcgcctgggcggaagaagagcggttggcggaggat
ttgcgcctgctgtatgttgcgctgacgcgttcggtgtaccactgcagcatcggtattgca
ccgcttattcagggaacgcgcaaaaagcagggagagacggatttgcatcgcagtgcgctg
gggtatctggtgcagggcggtcaggcgggggatgccgcctatttgcagggctgtcttcag
cagttggccgatgaaagcattgcgctttcgctgcttgaggcgcttgatgagcagccctgg
cagccgcaaagtatgaaagcagagcagctggcggccagacaggtcagccgacagatgcag
gatttttggcgggtgaccagctataccggcctgcagcaacacggcgccggcttgatgcag
gatctgctgcctcgtctggatgtcgatgctgcgggtgagcagacggctgaaagtgagccg
tcactgaccccgcacacctttccacgcggcgctgcgccaggcacctttttgcacagtctg
tttgaaacgctggattttacccagccgctggatcccgactggctggcggagcagctgcag
ttgaacggctatgatgcgtgttggcagccggtgctgcagacgtggatggagacgctgctg
cagaccgtactgaatgacagcggcgtcacgctggcgcagctgacgccgcaggctaaacag
gctgagctgcagttttatctgccgatcggccagctgctgcaggcatcgcagttggatgcg
ctggtgaagcagtatgatccactgtcggcacgctgtccggcgttggatttccaacgggtg
caagggatgctgaaaggctttatcgatctgattttctgctggcggggaaaatattacctg
ctcgactataagtccaactggctgggggaagacagcagcgcctatacgcagccggcgatg
gcgcaggcgatggcggaacaccgttacgatctgcagtaccagctgtataccctggcgctg
catcgctatctgcgtcaccgcctgatggactatgactaccagcgccactttggcggcgtg
atttatctgtttttgcgcggcgtcgatggccagcatcccggcaacggcatttttgcctgc
cggcccgaagccgatttggtggagggtatggaccggctgttcagcggcgacgataccctg
ggggaatctgaagcatga
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