Serratia rhizosphaerae: FO014_15765
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Entry
FO014_15765 CDS
T07504
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
srhz
Serratia rhizosphaerae
Pathway
srhz03030
DNA replication
srhz03430
Mismatch repair
srhz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FO014_15765 (dnaE)
03430 Mismatch repair
FO014_15765 (dnaE)
03440 Homologous recombination
FO014_15765 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srhz03032
]
FO014_15765 (dnaE)
03400 DNA repair and recombination proteins [BR:
srhz03400
]
FO014_15765 (dnaE)
Enzymes [BR:
srhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FO014_15765 (dnaE)
DNA replication proteins [BR:
srhz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FO014_15765 (dnaE)
DNA repair and recombination proteins [BR:
srhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FO014_15765 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QHA88300
LinkDB
All DBs
Position
3358318..3361806
Genome browser
AA seq
1162 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTGPLVKRAAALGMPALAITDFTNLCGLVKFYGTAHGA
GVKPIIGADFHVQSEVLGDELAELTVLAANNAGYQNLTLLISRAYQRGYGAAGPIIDRDW
LIEHREGLILLSGARMGDVGKFMLRGNQAQVEQCLAFYQQYFPDSYYLELIRTGRPDEEN
YLHAAVALAAERGLPVVATNDVRFLVEDDFDAHEIRVAIHDGFTLDDPKRPRNYSVQQYM
RSEDEMCELFADIPEALINSVEIAKRCNVTIRLGEYFLPQFPTGEMTTEDFLVTKSKEGL
EERLEFLYPDPEVRAQRRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKSGEAPIDITAIPLGDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAKSIGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAILEARNSGEQGYFKDLFDLCARSDIKKLNRRILEKLIMSGAFDRLGPHRAAL
MNSLPDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEQSYANVAPWQEQVVLDGERETLG
LYLTGHPITQYLKEIERYAGGMRLKDMHPTDRGKMTTAVGLVVAARVMVTKRGNRIGICT
LDDRSGRLEVMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTARELMDISEARE
KYARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRIDARAKLRFGATWRVTP
TDRLLIDLRTLVGNEQVELEFD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttattcacctgcgcgttcacagcgactactccatgatagatgga
ctcgccaagaccggtccgttggtgaagagggccgcggcgcttggcatgccggcgctggcc
atcaccgactttaccaacctgtgcggcctggtgaagttttacggcacggcgcacggcgcc
ggggtgaagccgatcatcggtgcggatttccacgtgcagagcgaagtgctgggcgatgaa
ctggccgagctgaccgtgctggcggcgaacaacgccggttatcaaaacctgacgctgttg
atttcccgtgcttaccagcggggctacggcgcggcaggcccgattatcgatcgtgactgg
ctgatcgaacaccgtgaagggctgattctgctgtctggcgcgcggatgggtgatgtgggc
aagtttatgctgcgcggcaaccaggcgcaggtcgagcagtgcctggcgttttaccagcag
tatttccccgacagttactacctggagctgatccgcaccggacgtccggatgaggaaaac
tacctgcacgcggcggttgcgctggcagccgaacgcggcctgccggtggtggccaccaac
gacgtgcgtttcctggtggaagacgattttgacgcgcatgaaattcgcgtcgctattcat
gacggctttaccctcgacgatcccaaacgtccgcgtaactacagcgtgcagcagtatatg
cgcagcgaagatgagatgtgcgaactgtttgccgatattcccgaagcgctgatcaacagt
gttgaaatcgccaagcgctgcaacgttactatccgtctgggcgagtatttcctgccgcag
ttcccgaccggtgagatgaccaccgaagacttcctggtcaccaagtcgaaagaggggctg
gaagagcgcctcgagtttctgtacccggatccggaggttcgcgcccagcggcgccctgag
tatgacgagcgtctggatatcgagctgaaagtgatcaaccagatgggcttccccggttac
ttcctgatcgtgatggagtttatccagtggtcgaaggataacgatgtaccggtagggccg
ggacgtggttccggtgccggctcactggtggcctacgcgctgaaaatcaccgatctggat
ccgctggagttcgacctgctgttcgaacgtttccttaacccggaacgtgtctcgatgccc
gactttgacgtcgacttctgcatggaaaaacgcgacctggtgatcgagcacgtggcggac
atgtacggccgcgaggcggtatcgcagattatcaccttcggcaccatggcggcgaaagcg
gtaatccgcgacgtgggccgcgtgcttgggcatccgtacggcttcgttgaccgtatctcc
aagctggtgccgcccgacccgggcatgacgctggagaaagcgtttgccgccgagccgcag
ctgccggaaatctacgaggcggacgaagaggtcaaagcgctgatcgatatggcgcgcaag
ctggaaggcgtcacccgtaacgccggtaaacacgccgggggcgtggtgatcgcgccgacc
aagattaccgacttcgcgccgctgtactgcgacgccgaagggcatcacccggtgacccag
ttcgacaagaacgatgtggaatacgccgggttggtgaagttcgacttcctggggctacgt
accctgaccatcatcgactgggcgctggagatgatcaacgcccggcgagccaagagcggc
gaagcgccgattgatatcacggcgatcccgctcggcgacaagaaaagttttgacatgctg
cagcgctcggaaaccacggcggtgttccagcttgaatcgcgcggcatgaaagacctgatc
aaacgcctgaagcccgactgtttcgaagatatgatcgcactggtggcgctgttccgtccg
gggccgctgcagtccggcatggtggataactttatcgaccgtaaacatggccgtgaagag
atctcctacccggatatccagtggcagcatgagtcgctcaagccggtgctggaaccgact
tacggcattatcctgtatcaggaacaggtgatgcagattgcccaggtgctggccggctat
acgctgggcggtgcggatatgctgcgtcgtgcaatgggtaagaaaaagccggaagagatg
gcgaaacagcgctcggtatttgaagagggcgcgaagagcatcggcgtcgacggcgaactg
tcgatgaaaatctttgacctggtggagaaattcgccggttatggctttaacaaatcccac
tccgccgcctatgcgctggtatcctaccagacgctgtggctgaaggcgcactacccggcc
gagtttatggcggcggtaatgactgccgatatggacaataccgacaaggtggtcggcctg
gtggacgaatgctggcgtatggggctgaagatcctgccgccggacatcaacagcggcctg
tatcacttccacgtcaatgacgacggtgagattgtttacggcattggcgcgattaaaggt
gtgggtgaagggccgattgaggctattcttgaagcacgtaacagtggcgagcagggctat
tttaaagatctgtttgacctgtgcgcgcgctcggatatcaaaaagcttaaccggcgtatt
ctggaaaagctgattatgtccggcgcattcgaccggctggggccgcaccgcgccgcgctg
atgaactcgctgcctgatgcattgaaagcggcggatcagcatgccaaggccgaggctatc
ggccaggtggatatgtttggcgtactggcggaagcgccggaacaggtggagcaatcttac
gccaacgtggcgccgtggcaggagcaggtggtgctggacggtgagcgggaaacgctgggg
ctgtatctgaccggccacccgattacccagtatctgaaggagatcgaacgttacgccggc
ggcatgcgtttgaaagatatgcacccgacggaccggggcaagatgaccaccgccgtcggg
ctggtggtcgccgcgcgcgtaatggttaccaaacgcggcaatcgcatcggtatttgtacc
ctggatgaccgttccggccgtcttgaggtgatgctatttaccgacgcgttagaaaaatac
cagcatttgttggaaaaagaccgtatcctgattgccagtggacaggtcagctttgatgac
tttagcggcgggcttaaaatgaccgcccgtgaactcatggacatcagtgaagcccgggaa
aaatacgctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttg
aaccgtctccgccagtcgttggaaccgcatcgatcggggacgattccagtgcatctgtac
tatcaacggatcgacgctcgcgccaagctgcgttttggcgcaacctggcgagtgacgccc
acggaccgcttgttgatagacttacggactttggtaggtaatgagcaggtggaactggaa
tttgactaa
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