Serratia rhizosphaerae: FO014_16940
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Entry
FO014_16940 CDS
T07504
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
srhz
Serratia rhizosphaerae
Pathway
srhz00300
Lysine biosynthesis
srhz01100
Metabolic pathways
srhz01120
Microbial metabolism in diverse environments
srhz01230
Biosynthesis of amino acids
Module
srhz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FO014_16940 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srhz01002
]
FO014_16940 (dapE)
Enzymes [BR:
srhz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FO014_16940 (dapE)
Peptidases and inhibitors [BR:
srhz01002
]
Metallo peptidases
Family M20
FO014_16940 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
QHA88520
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Position
complement(3622248..3623375)
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AA seq
375 aa
AA seq
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MICPVIDLAQQLIRRPSLSPHDEGCQAMLIERLTAIGFTVEQMDFEDTQNFWAWRGEGET
LAFAGHTDVVPSGDESHWDNPPFEPTIRGGMLYGRGAADMKGSLAAMVVAAERFVAANPN
HRGRLAFLITSDEEASATHGTVKVVETLMARNERLDYCLVGEPSSTDRVGDVVKNGRRGS
ITANLRIHGVQGHVAYPHLADNPVHRAMPALNELVSIEWDRGNDYFPPTSMQIANIQAGT
GSNNVIPGELFVQFNFRFSTELTDAIIKQRVEELLERHQLNYSIEWRLSGQPFLTPRGAL
VDAVVNAVEYYTELTPQLLTTGGTSDGRFIAQMGAQVVELGPVNATIHKINECVNAADLQ
QLSRMYQRIMEQLIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgatttgccccgtgatcgatctggcgcaacagttaatccgccgcccttccctcagcccg
cacgatgaaggctgccaggcgatgctgattgagcgcctgacggctatcggctttaccgtc
gagcagatggatttcgaagatacgcagaatttttgggcctggcgcggcgaaggcgagacg
ctggcgttcgccggccataccgacgtggtgccgagcggcgatgaaagccactgggacaac
ccgccgtttgaaccgaccatccgcggcggcatgctgtacggccgcggcgcggccgatatg
aaaggctcactggcggcgatggtggtcgcggcagaacgcttcgtcgccgccaaccccaac
catcggggacggctggcgtttctcatcacctccgatgaagaggccagcgccacccacggt
acggtgaaagtggtcgagacgctgatggcgcgcaacgagcggctggactactgcctggtc
ggcgaaccgtccagcaccgaccgcgtcggcgacgtggtgaaaaacggccgccgcggctcc
atcaccgccaacctgcgtatccacggcgtacagggccacgtcgcctatccgcacctggcg
gataacccggtgcaccgcgccatgccggcgctgaatgaactggtaagcatcgaatgggat
cgcggcaacgactatttcccgccgaccagcatgcagatcgccaatatccaggccggcacc
ggcagcaataacgtcatccccggtgaactgtttgtccagtttaatttccgcttcagcacc
gaactgaccgacgccatcatcaaacagcgggtcgaagagctgttggagcgccatcagcta
aactacagtatcgaatggcgtctttccggccagccgttcctcaccccgcgcggcgcgctg
gtggatgcggtggttaacgccgttgagtattatactgagctgacgccgcagctgctgacc
accggcggcacctccgacgggcgctttatcgcccagatgggcgcgcaggtggtggaactg
gggccggtcaacgccactatccataaaatcaacgaatgcgtgaacgccgccgatctgcag
cagctcagccggatgtatcaacgcattatggagcaactgatcgcatga
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