Serratia rhizosphaerae: FO014_20100
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Entry
FO014_20100 CDS
T07504
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
srhz
Serratia rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srhz03009
]
FO014_20100 (dbpA)
Enzymes [BR:
srhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FO014_20100 (dbpA)
Ribosome biogenesis [BR:
srhz03009
]
Prokaryotic type
rRNA helicases
FO014_20100 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Ebola-like_HR1-HR2
Toxin_2
Motif
Other DBs
NCBI-ProteinID:
QHA89102
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All DBs
Position
4313182..4314564
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AA seq
460 aa
AA seq
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MSTVSFSSLPLPAAQLANLNELGYAAMTPVQAAALPAILQGQDVRARAKTGSGKTAAFGI
GLLDKINVGQVATQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGPQLDSL
VHAPHIVVGTPGRVQEHLRKKTLQLDALKVLVLDEADRMLDMGFADDIDDVIAYTPPQRQ
TLLFSATYPDGIERISARVQRTPLSVEVADDDAPLTIEQRFYETTRDQRPALLLAAIRHY
QPASCVVFCNTKRDCQSVCDALEARDISALALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKDLELVVNYEMAFDPEVHVHRVGRTGRAGMSGLAITLCTPQEMARAHALEEY
LQADLSWAPVSELSGASNAPLEAEMATLCIDGGRKAKIRPGDILGALTGEAGLTAAEVGK
IDMFPMHAYVAIRKNSARKALQRLREGKIKGKNCKARLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagtttccttttcttccctgccgctgccagccgcacagttggccaacctcaac
gaactggggtatgccgccatgacgccggtgcaggccgcggcactgcccgctattttgcaa
gggcaggacgtacgcgccagagcaaaaaccggcagcggtaaaacggcggcgttcggcatc
ggcctgttggataaaatcaatgtcgggcaggtggcgacgcaggcgctggtgctgtgcccg
acgcgtgaactggccgatcaggtcagcaaagagctgcgccgtctggcgcgctttacccag
aatattaaaatcctgacgctgtgcggcggccagccgatggggccgcagctggattcgctg
gtgcatgcgccgcatatcgtggtgggtacgccggggcgggtgcaggaacacctgcggaaa
aaaacgctgcagctggacgcgctgaaggtgctggtgctggatgaggccgatcgtatgctg
gatatggggttcgccgacgatatcgacgacgtgatcgcctacacgccgccacagcgccag
acgctgttgttttccgccacttatcctgacggcatcgagcgcatcagcgcccgcgtgcag
cggacgccgctcagcgtggaagtggccgacgatgacgcgccgctcaccatcgaacagcgc
ttctatgaaacgacgcgcgaccagcgtccggcgctgctgctggccgctatccgtcactat
caaccggcttcctgcgtggtgttctgcaacaccaagcgcgactgtcagagcgtgtgcgat
gcgctggaagcacgtgatatcagcgccctggcgctgcacggcgacctggaacagcgcgac
cgcgatcaggttctggtgcgttttgccaaccgcagctgccgcgtattggtggcgaccgat
gtcgccgcgcgcgggctggatatcaaagatcttgagctggtggtgaactacgaaatggcc
ttcgatccggaagtgcacgtgcaccgcgtcggccgtaccggtcgcgccggcatgagcggc
ctggcgatcactctatgcacgccgcaggaaatggcgcgggcgcatgcgttggaagagtat
ctgcaggcggatctgtcgtgggcgccggtgagtgaactgagcggggcgagcaacgcgccg
ttggaagcagagatggccacgctgtgcatcgacggcggccgcaaggcgaaaatccgtccc
ggtgatattctgggagcgctgaccggcgaagcggggctgaccgcggcggaagtggggaaa
attgatatgttcccgatgcatgcctacgtggccatccgtaaaaacagcgctcgtaaagcg
ctgcagcgcctgcgcgaaggcaaaatcaaagggaaaaactgcaaggcgcgcctgctgaaa
taa
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