Serratia rhizosphaerae: FO014_20590
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Entry
FO014_20590 CDS
T07504
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
srhz
Serratia rhizosphaerae
Pathway
srhz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FO014_20590 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhz03400
]
FO014_20590 (ruvB)
Enzymes [BR:
srhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FO014_20590 (ruvB)
DNA repair and recombination proteins [BR:
srhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FO014_20590 (ruvB)
RecFOR pathway proteins
FO014_20590 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_16
AAA_3
AAA_14
Rad17
AAA_2
TIP49
nSTAND3
AAA_18
RNA_helicase
AAA_17
AAA_28
NTPase_1
NB-ARC
AAA_24
ABC_tran
Bac_DnaA
bpMoxR
Sigma54_activ_2
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QHA89190
LinkDB
All DBs
Position
4405276..4406280
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AA seq
334 aa
AA seq
DB search
MIEADRLISAEPITEEEVIDRAIRPKMLAEYVGQPHVREQMEIFIQAARLRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
AVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLEHIVSRSASCLGLTLSPDGAHEVARRARGTPRIANRLLRRVRDFAEVRADG
RMTGEVAAQALNMLNVDAEGFDYMDRKLLLAIIDKFTGGPVGLDNLAAAIGEERETIEDV
IEPFLIQQGFIQRTPRGRMATNHAYKHFGIEREE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgaccgcctgatctcagccgaaccgatcacggaagaagaagtgatcgat
cgcgccatccgccccaaaatgctggcggagtacgtgggccaaccgcacgttcgcgagcag
atggaaatctttattcaggcggccaggctgcggggcgatgcgctcgatcacctgctgatt
ttcggtccgccggggttggggaaaaccacactggccaatatcgtcgccaatgaaatgggc
gtcaacctgcgcactacgtcaggtccggtgctggaaaaggccggcgatctggcggcgatg
ctcaccaatcttgaaccgcacgacgtgctgtttatcgatgagattcaccggctgtcgccg
gcggtggaagaggtgctgtacccggcgatggaagactatcagctggatattatgatcggc
gaagggccggcggcgcgttcgatcaaaatcgatctgccgcctttcaccctggtcggcgcc
accacccgcgccggctcgctgacctcgccgctgcgcgatcgcttcggcattgtccagcgg
ctggagttctatcaggtggccgatctggagcacatcgtctcgcgcagcgccagctgcctg
gggctgacgctgtcgccggacggcgcacacgaagtggcgcgccgggcgcgcggcacgccg
cgtatcgccaaccgtttattgcgccgggtgcgggatttcgccgaggtgcgggccgacggc
cggatgaccggcgaggtggcggcgcaggcgctgaatatgctgaatgtggatgcggaaggg
ttcgactatatggaccgtaagctgctgctggcgattatcgataagtttaccggcgggccg
gtagggctggataacctggcggcggcgattggcgaagagcgtgaaacgattgaagacgtg
attgagccgttcctgatccagcaggggtttattcagcgcacgccgcgcggacgcatggcg
accaaccatgcctataagcatttcggtattgagcgcgaagagtga
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