Selenomonas ruminantium subsp. lactilytica: SELR_04180
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Entry
SELR_04180 CDS
T01799
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri00470
D-Amino acid metabolism
sri00550
Peptidoglycan biosynthesis
sri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SELR_04180 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SELR_04180 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sri01011
]
SELR_04180 (murD)
Enzymes [BR:
sri01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SELR_04180 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sri01011
]
Precursor biosynthesis
Amino acid ligase
SELR_04180 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
2-Hacid_dh_C
Pyr_redox
Pyr_redox_2
NAD_binding_8
Pyr_redox_3
GIDA
DAO
FAD_oxidored
Mur_ligase
HI0933_like
NAD_binding_7
FAD_binding_3
KARI_N
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
BAL82126
UniProt:
I0GMY9
LinkDB
All DBs
Position
475102..476475
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AA seq
457 aa
AA seq
DB search
MDLTGKKVLIIGAGISGFAAAKITRRLGAQVTLSDAKNEADFKDSEESFAELRDMGVALV
FGPQSEELLDGVSLVIVSPAVPARIPLIQAAYQRKIRVASEVELAYRLKKAPICAVTGTN
GKTTTVTLLGLLLEAHFDKVGVGGNIGVPLSEVALEIPADGCIAAEISSYQMEVTEEFHP
RVATVLNVTPDHIVRHGSIEEYQRMKERMFAQQNSKDFLVLNYDDDRVKDMANRASAHVV
FFSRQVHLHEGAYLEGDMLTIAWNGEDYPLCTIGELGIKGAHNVENALAAVMSAFLAGCT
AEEMIPVLKSFRGVEHRIEYVRTLNGVEYYNDSKATNTDSAIKALETFADGIVLLAGGDD
KMTDLTDFLVRVKERVTDLVLVGAAADRFEQEALKHGYPAEHIHRAGFSMEKAVELAHDL
AKAPQVVLLSPACASFDMYNGMAERGRHFKDLVDKLQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatttgacgggcaagaaggtactcattatcggtgctggcatcagcggctttgcggcg
gcgaaaattacccgccgtttaggggcgcaggtgacgttgagcgatgcgaagaatgaggcg
gatttcaaggacagtgaggagagctttgctgagctgcgggacatgggggtggcccttgtg
tttgggccccagtccgaggaactgctggacggcgtaagcctggtcattgtttcaccggct
gtacctgcccgtatccccttgatccaggctgcgtaccagcggaaaatccgcgtggccagc
gaagtggagctggcctatcggctgaagaaggcacccatctgtgccgtgacgggcaccaat
ggcaagaccactacggtaacgctgttgggcctgttgctggaagcgcatttcgataaggtc
ggcgtggggggcaatatcggtgtgcctctgtcggaagtggcgttggagattcccgccgac
ggctgcatcgccgccgagatttccagctatcagatggaggtcaccgaggaattccatccc
cgtgtggcaacggtcctcaatgtcactcccgaccatatcgtgcgccatggttccatcgag
gaataccagcgcatgaaggaacgcatgtttgcccagcagaatagcaaagatttcctggtg
ctgaactatgacgatgaccgggtaaaggatatggccaatcgtgccagtgcccatgtggtt
ttcttcagccgtcaggtgcatctccatgaaggggcttatctcgaaggggatatgctgacc
attgcctggaacggcgaggattatcctctctgcaccatcggcgagctgggcatcaagggg
gcccataatgtggaaaatgccctggctgctgtcatgtcggcattcctggctggttgcacg
gcagaagagatgatacccgtactcaagtccttccggggcgtggagcatcgcattgaatat
gtgcgcacgctgaatggtgtggaatattacaacgactccaaggccaccaatacggattcc
gccatcaaggcattggaaacctttgcggatggcattgtgctgctggcaggcggcgatgac
aagatgaccgacctgacggatttcctggttcgcgtcaaggagcgggttacggatctggtg
ctggtcggtgctgctgccgaccgcttcgagcaggaggccttgaagcacggctatccggct
gagcatatccatcgggccggcttctccatggaaaaggccgtggaactggcccatgacctg
gccaaggcaccgcaggtggtgctgctttctccggcctgcgccagcttcgatatgtataat
ggcatggcagagcgcggtcgtcacttcaaggatttagtggataaattacagtaa
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