Selenomonas ruminantium subsp. lactilytica: SELR_04560
Help
Entry
SELR_04560 CDS
T01799
Symbol
dnaX
Name
(GenBank) putative DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri03030
DNA replication
sri03430
Mismatch repair
sri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SELR_04560 (dnaX)
03430 Mismatch repair
SELR_04560 (dnaX)
03440 Homologous recombination
SELR_04560 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sri03032
]
SELR_04560 (dnaX)
03400 DNA repair and recombination proteins [BR:
sri03400
]
SELR_04560 (dnaX)
Enzymes [BR:
sri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SELR_04560 (dnaX)
DNA replication proteins [BR:
sri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SELR_04560 (dnaX)
DNA repair and recombination proteins [BR:
sri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SELR_04560 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_30
RuvB_N
TIP49
AAA_22
AAA_5
AAA_19
AAA_16
AAA_24
AAA_14
AAA_7
DNA_pol3_delta_C
Mg_chelatase
AAA_2
AAA_assoc_2
AAA_6
PIF1
Rad17
AAA_18
AAA_28
TsaE
RCF1-5-like_lid
DnaX_C
RNA_helicase
DUF815
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAL82164
UniProt:
I0GN27
LinkDB
All DBs
Position
519198..520916
Genome browser
AA seq
572 aa
AA seq
DB search
MAYIALYRKWRPKTFADLVGQEHISRTLSNAINTGRIGHAYLFSGPRGTGKTSTAKILAK
ALNCEQGPTPEPCGKCRACQKINDGSSMDVFEIDAASNRGIDEIRDLRETVKFAPVDGRY
KVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTEAHKVPPTIQSRCQRYDFKRITV
EEIRGRLETVTAEMGLQVEPEALDMIAIQADGGLRDALSLLDQCSALADGELTAARVRQT
LGLIGHESIYRLTEAIYAHKSQTALAVLAELLRDGKELKQVLTELSLHLRSLMIYQSTGT
LEQMDLYAEPDEILQTQGKFFSAEEIMAMIKKLHEALAELKWSPQPRITVEVALLALCNP
ADSAVMPVQAAATAVDNGRLASLEAKLAQMAAQLAARPAAAPAQPAAKAAPQPPKRPMPA
AAPVQEVQAVPITASDAEVWEKLLQALKERKMPAFACVNQGQFAGMTETQFLVKFQGVLM
ADLAMRNYRSLIEEILQELTGRSLRLHCSGENTPAMPPPRPVPKKKTLPPPPPEEPVIHV
DLDSMPPEERAPLEKAFEIFGDHVVEIEEDNK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcctatattgcactttatcgtaaatggcgtcccaagacctttgcggatctggtgggg
caggagcatatcagcaggacgctcagcaacgccatcaataccgggcggattggccatgct
tacttgttctcggggccccgggggactggtaagaccagtacggcgaaaattttggccaag
gcacttaactgtgagcaggggccaacgccggagccttgcggtaagtgccgggcctgtcag
aaaatcaatgacggttcctccatggacgtgttcgagatcgatgcggcttccaatcgcggt
atcgatgagattcgtgacttgcgggaaacggtgaagtttgcgccggtggatgggcgttac
aaggtctatatcatcgacgaagtgcatatgctgaccacagaggccttcaatgcgttgttg
aaaaccttggaagagccgcccgcccatgtggtattcatcctggcaacgacggaagcccat
aaggtgccgccaaccatccagtcccgctgtcagcgctatgattttaaacggatcaccgtg
gaggaaatccgtggccggttggagactgtcacggcggaaatggggctgcaggtggagccg
gaagccttggatatgattgccattcaggccgatggcggcctgcgcgatgctctgtcgttg
ctggatcagtgctccgcgttggcggatggcgaacttacggctgcccgggtgcggcagacc
ttggggcttatcgggcatgagtcgatctaccgcctgacagaagctatctatgcccataag
agtcagacggcattggcggtattggcggagcttctgcgggatggcaaggagctcaagcag
gtgctcacggagctgtcgctgcatctgcgcagtctgatgatttatcagtctacgggaact
ttggaacagatggatctgtatgccgagccggatgagattttgcagacgcagggcaagttc
ttcagtgccgaagagatcatggccatgatcaaaaaactccatgaggctctggcggagcta
aagtggtcgccacagccgcggattacagtggaggtagccctgctggcgctctgcaatccg
gcagatagcgccgttatgccggtgcaggcggcagcgaccgccgtggataatggacggctg
gccagcctcgaagccaagctggctcagatggccgcccagctggcggcccgcccggcggct
gcgcctgctcagcctgcggcaaaggccgccccgcagccgccaaagcgtccgatgcctgct
gccgcgcctgttcaggaggtgcaggccgtgcccatcacggccagcgatgcggaggtttgg
gaaaaacttctgcaggctttgaaggagcgcaagatgcctgcttttgcctgtgtgaatcag
ggacagtttgcgggcatgacggaaacgcagttcctggtgaagttccagggggtgctgatg
gcggatttggccatgcgcaactatcgttccttgatagaagagatattgcaggagcttaca
gggcgttccctgcgtctgcattgcagtggggagaatacgccggctatgccgccgccccgc
cctgtaccgaagaaaaaaacgttgccgccgcctccgccagaggagccggttatacatgtt
gatttggattctatgcctcccgaggagcgtgcccccttggagaaggcctttgagattttt
ggggaccatgtggtggaaatcgaggaggacaataaatga
DBGET
integrated database retrieval system
