Selenomonas ruminantium subsp. lactilytica: SELR_06600
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Entry
SELR_06600 CDS
T01799
Symbol
yqeV
Name
(GenBank) putative MiaB-like tRNA modifying enzyme family protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sri03016
]
SELR_06600 (yqeV)
Enzymes [BR:
sri01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
SELR_06600 (yqeV)
Transfer RNA biogenesis [BR:
sri03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
SELR_06600 (yqeV)
Prokaryotic type
Methylthiotransferases
SELR_06600 (yqeV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
DAHP_snth_FXD
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BAL82368
UniProt:
I0GNN1
LinkDB
All DBs
Position
725881..727179
Genome browser
AA seq
432 aa
AA seq
DB search
MPKVALTTLGCKVNQFETETMEGLFKKSGYDIVPFEEKADFYVINTCSVTSLGDRKSRQI
IRRAQRTNENAIIAVCGCYSQVHPEEIKAIEGVRVVLGTKERSRIVEYVEQAAREDGILD
EVGNIMEAHEFEDIPIYDMPQRTRAFLKIEDGCQNFCSYCIIPYARGPVKSRHLDKIHSE
AKKLVDAGFKEIVLTGIHLGAYGKDLDGEVTLADACREVLKVEGLKRLRLGSLESIELSP
DLFALIREDDRFCAHLHLPLQAGSDAVLKDMNRHYDTAEFGRLIEQVEREVPGVAVSTDI
IVGFPGETEEQFTDSLKFVEKMNFSRMHVFPYSKRSGTPAAERKDQIPDPVKKDRAKRMQ
ELANRKTEEFHQHFLGQTKQVLFETNNDGVTDGLTDNYIRVYTDSPVTCGEIYQVKLERL
YQDGVWGTVENR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaaggtggcactcacgaccttgggctgcaaggtcaatcagtttgaaacggaaacc
atggaaggcctgttcaagaaaagcggctacgatatcgtgccctttgaggaaaaggcggac
ttctatgtgattaatacatgctcggtaacgagcctgggagaccggaaatcccggcagatc
atccgccgggctcagcgcaccaatgaaaatgccattatcgcggtctgtggctgctattcg
caggtgcatcctgaagaaatcaaggccattgagggtgtgcgcgtggtactgggcacgaaa
gagcgcagcaggattgtggaatatgtggagcaggcggccagagaagatggcatcctggat
gaagtgggcaatatcatggaagcacatgagttcgaggatattcccatctacgatatgccc
cagcgtacccgcgcgttcctcaagattgaggacggctgccagaacttctgctcctactgc
atcattccctatgcccgtggccccgtgaagtcccgtcatctggacaagattcacagcgag
gcgaagaaacttgtggacgcaggcttcaaggaaatcgtgttgaccggcatccacttaggc
gcttatggcaaggatttagacggtgaagtgacactggcggatgcttgccgggaagtcttg
aaggtggaggggctgaagcgtttgcgccttggctcgttggaatccattgagctttcgccg
gatctgtttgcactgatccgggaggatgaccgcttctgtgcgcatctccatctgccatta
caggctggttctgatgccgtgctcaaggatatgaaccgccattatgatacggctgaattt
ggccgtctgattgaacaggtggaacgggaagttcccggtgtggcggtatccacggatatt
attgtgggcttccctggggagacggaggaacagtttacggacagcctgaagtttgtcgag
aagatgaacttctcccgcatgcatgtgttcccttattccaagcgcagcggcacgccggca
gctgaacgcaaggaccagattcccgatccggtcaagaaagaccgcgccaagcgcatgcag
gaactggctaatcgcaagacggaggaattccatcagcatttcctggggcagaccaagcag
gtgctctttgaaacaaacaatgatggtgtgaccgatggccttacggataattatattcgc
gtgtatacggacagcccggtgacatgtggcgaaatctatcaggtgaagctcgagcgtctc
tatcaggatggtgtctggggcacggtcgaaaacagataa
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