Selenomonas ruminantium subsp. lactilytica: SELR_07140
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Entry
SELR_07140 CDS
T01799
Symbol
rpoA
Name
(GenBank) putative DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SELR_07140 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sri03021
]
SELR_07140 (rpoA)
03400 DNA repair and recombination proteins [BR:
sri03400
]
SELR_07140 (rpoA)
Enzymes [BR:
sri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SELR_07140 (rpoA)
Transcription machinery [BR:
sri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SELR_07140 (rpoA)
DNA repair and recombination proteins [BR:
sri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SELR_07140 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Mg_chelatase_C
PASTA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BAL82422
UniProt:
I0GNT5
LinkDB
All DBs
Position
766961..767920
Genome browser
AA seq
319 aa
AA seq
DB search
MIDIEKPKIEIVEISEDNRYGKFVCEPLERGYGTTFGNSLRRMLLSSLEGSAITSIRIDG
VLHEFSTIPGVRDDVTNIVLNLKQLCLKMAGSEPKVIRIDVEGEKEVTAADIICDADIEI
LNPDLHIATVDATGKLKIEMTVARGRGYIPAERNKKPDDTIGVIPIDSIFSPVQRVNYTV
QDTRVGNETDYDKLILEVWTDGSLRPEEAVSKAAGILVMHLKLFQSMDGLPEEIEEEEAT
FPEEVEDDTSKVLEMTIEDLDLSVRSFNCLKRANINTVADLAEKTEDDMMKVRNLGRKSL
EEVKKKLEELGLALRVNND
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatagacatcgagaaaccgaaaattgaaattgtggaaatcagtgaagacaaccgttac
ggcaagttcgtctgcgaaccccttgaacgtggttacggtacgactttcggcaacagcctg
cgccgtatgcttctgtcttccctggaaggttctgcaattacctccattcgcattgatgga
gttctccatgagttctccaccattccgggtgtccgggatgacgtgaccaacatcgttctg
aacctgaagcagctctgcctcaagatggcagggagcgagcccaaggtgatccgcattgac
gtggaaggcgaaaaggaagttacggctgccgacatcatctgtgatgccgacattgagatc
ctcaatccggacctccacattgcaacggttgacgcaaccggcaaactcaagattgagatg
acggttgcccgtggccgtggctacattccggcagaacgcaataaaaagccggatgacacg
attggagtaattcccattgactcgattttctccccggtacagcgtgtaaactacaccgtg
caggacacgcgtgtaggtaacgagaccgactatgacaagctgattctcgaagtatggacc
gatggttccctgcgtccggaagaagctgtcagcaaagcagccggtatcctcgtgatgcac
ctgaagctgttccagagcatggacggtctgccggaagaaatcgaagaggaagaagcaacc
ttccccgaagaggtagaggatgatacttccaaggtcctcgaaatgaccattgaagacctc
gacctctcggtacgttccttcaactgtctgaaacgcgccaacatcaacacggtcgctgat
cttgctgagaagacggaagatgacatgatgaaggtccgcaacctcggccgcaagtctctt
gaagaagtcaagaagaagctcgaggaactcggtttggcactgagagtaaacaacgattga
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