Selenomonas ruminantium subsp. lactilytica: SELR_08560
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Entry
SELR_08560 CDS
T01799
Symbol
addA
Name
(GenBank) putative ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sri03400
]
SELR_08560 (addA)
Enzymes [BR:
sri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SELR_08560 (addA)
DNA repair and recombination proteins [BR:
sri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SELR_08560 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BAL82564
UniProt:
I0GP77
LinkDB
All DBs
Position
917562..921455
Genome browser
AA seq
1297 aa
AA seq
DB search
MPYTKDQQTAIEARGRNILVAAAAGSGKTRVLVERIIQQLLHDELDVDELLVVTFTNAAA
AEMRERIEGTLARELDGITDREIAARLERQMILLTGADISTFHSFCQRVIRQHIESIDVD
PKFRLASEQEMILLRQDVLETMLEEKYERPERAEDLLVWEEFISFMDDYGDEKGDETIKE
AILKLHAFAQSQPFPAKWLQSQQEAKTETLANSPWLGAVIPEMKNGLLAVISQYEELAAL
GSSQSDAAFAAAWAPYGELMQQDLAGLADIREAFNVLALSPEADKWDELTKKVSKFSWGA
MRGKIYNDLKSLYPDSRQTFVDRRDAVKKALTKFAETYMKQSAAQMEEDMAANQQVAGTY
AQLALDFGSALQAAKQERNVLDFNDLEHYALQILSDTDAEGKIVPSEAAKTLREKYKSIM
VDEYQDTNGVQETILNLIARENNRFTVGDVKQSIYRFRLADPTLFQVKYDSFVEEPTAGD
KNQLITMKQNFRSRAEVLAPINFVFDQIMTREAAEIEYDDRSKLYPGADYPSHEHTLAGP
MELDLILQEQEDAKEKKKAPVDTEAEEEGEEDLQGFKLEAQYIAQRIAKLMEESPFVYDK
DQDGYRPLAYRDIAVLLRAVSGKANILLETLRKNSIPAYANVDGGYFEAAEVRLMLALLK
VIDNVRQDIPLAAVLASPIGGFSMEELTQIRLASETGDLYDGLLASFSLDSKLPQELAGR
IAAFQADLARWRSFAISHSVPELIWLLYRDTGYYDYVGGIKGGLLRQANLRMLADRAADY
ERTNYRGLFRFLRFIENLQKRETDLSVARTLGASENVVQIMTIHRSKGLEFPVVIVADTA
KGFNFKDLSSSFLMHKDLGIGMKIAQRSRVGRQIYKSLPWQSVATKIRAESKAEEMRILY
VAMTRAREKLILTGVVKGKDLAKKFQKYCQYVEQEEAQLPTHAITGAKSYLDWVAMALSR
HSAGEPLRQAAGLEGVMANLEQSIEPAAQIKVNLCPAQSVTTDKQDEDAADEFLQAAVHL
QPMPTSAYQEQVEHMLSWQYADKGLANVPAKLTVTEIKRRFVAGLEHDEELPAARQLIVM
NEQEELEAVAEGGEVPAAEAEKTAEEIGADWPRPRFMREKQTSLSPMERGTIMHTVMQRL
DFHGDVSYQGIKKQVEALEAKGILPEGAGKVVYIKGIQGFFASPLGAQVQNARRLYRELP
FSRMLKAKDFYPEVQEEGELVFTQGVIDLLVETAEGELILVDYKTDRLTDPARIRRRYQI
QLDLYRDAVEAILGRQVDKTYLYLLQNGSFVPMDAVE
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgccatacaccaaggatcaacagacagccattgaggctcgcgggcggaatatattggtc
gccgctgccgccggttccggcaagacgcgggtgctggtggaacgcattatccagcagctg
ctccatgatgaactggatgtggatgaattattggtggtgaccttcactaatgcggcggcg
gcagagatgcgggaacgcattgaaggaaccctggcccgggaattggacggcatcaccgac
cgggaaatcgccgctcgtctggaacggcagatgattttgctgaccggtgccgatatcagt
accttccattccttttgccagcgggtgatccgccagcatatcgaaagcattgatgtggat
cccaagttccgtctggccagcgaacaggaaatgatcttgctcaggcaggatgttctggaa
accatgctggaggaaaaatacgaacgcccggaacgggcagaggatctgctcgtctgggaa
gaattcatttcctttatggacgactatggtgatgaaaagggcgatgagacgatcaaggag
gccatattgaaacttcatgcctttgcccagagccagccttttcctgcgaaatggctgcaa
agccagcaggaagcaaagacagagactttggccaattctccgtggctgggtgctgttatc
cccgagatgaagaatggcttgctggcggtgatcagccagtatgaggaattggctgccttg
ggcagttcacagtctgatgcggcttttgcagcggcctgggcaccctatggggagctgatg
cagcaggatctggccggcttggccgatatccgcgaagccttcaatgtgctggccctgtcc
ccggaggcagataaatgggatgaactgaccaaaaaggtcagcaagttttcctggggggcc
atgcggggaaagatctataacgacttgaagtcgctttatccggatagccggcagaccttt
gttgaccgtcgggatgctgtcaaaaaggcgctgaccaaatttgccgaaacctatatgaag
caatcggcggcgcagatggaagaggatatggcagccaatcagcaggtggctggaacctat
gcccagctggcattggattttggcagtgccctgcaggcggccaagcaggagcgtaatgtg
ctggatttcaacgatttggagcactatgcgctgcagattctcagcgatacggatgcggaa
ggcaaaattgtccccagcgaagcggcaaaaaccttgcgggaaaaatataagtccattatg
gtggacgagtatcaggacaccaatggtgtacaggaaaccattctgaatctgattgcccgg
gaaaacaatcgctttaccgtaggggatgtgaagcagagtatctatcgtttccgcctggct
gatccgacacttttccaggtcaagtacgacagctttgtggaagaaccgacggcgggggac
aagaatcagctgatcaccatgaagcagaatttccgcagccgggcggaagtgctggctccc
atcaattttgtctttgaccagatcatgacgcgggaggcggcggaaatcgaatatgatgac
cgcagcaagctctatcctggtgcagattacccgtcacatgaacataccctggccgggcct
atggaattggatttgatcctgcaggagcaggaagatgccaaggaaaagaaaaaagcccct
gtggatacagaggcggaggaggaaggcgaagaggatctgcagggcttcaagctggaagcg
cagtacattgcccagcgcatcgccaaattgatggaggagagtccctttgtctacgataag
gatcaggatggatatcgtcctctggcctatcgggatattgcggtgcttctgcgggcggtg
agtggtaaggccaatatcctgctggaaaccctgcgtaaaaacagcattcctgcttatgcc
aatgtggatggcggctattttgaagcggcagaagtgcggctgatgctggcgctgctgaag
gtcatcgacaatgtgcgtcaggatattccgctggctgcggtgctggcttccccaatcggc
ggcttttccatggaagaacttacgcagatccgtctggcttcagaaaccggcgatctttat
gatggtctgttggccagtttttcgctggacagtaaattgccgcaggagctggctggccgc
atagctgcatttcaggcagatttggcccgctggcgcagcttcgccatcagtcatagcgtg
ccggagctgatctggctgctctatcgggatactggttactacgattatgtgggcggtatt
aagggcggtctgctgcggcaggccaatctgcgcatgctggccgatcgggcggctgattat
gagcgcactaactaccggggactgttccgtttcctgcggtttatcgagaatctgcagaaa
cgggagacggatttgtctgtagccagaaccttgggcgccagcgagaatgtggtgcagatc
atgaccattcaccgcagcaagggcttggagtttcccgtggtcatcgtggcggatacagcc
aagggtttcaacttcaaggatttgagcagttccttcctgatgcataaggatttgggcatc
ggcatgaaaattgcccagcgctcaagggtgggacggcagatctacaaatccctgccctgg
cagtctgtggccactaaaatccgcgcggaatccaaggctgaggaaatgcgtatcctctat
gtagccatgaccagagccagagaaaagctgattctgaccggtgtggtgaaaggaaaggat
ctggccaagaagttccagaaatactgtcagtatgtggaacaggaagaggcgcagctgcca
acccatgccatcaccggtgccaagagttatctggattgggtggccatggcgctgagccgt
catagtgcaggcgagccactgcggcaggcggctggacttgaaggagtgatggcgaatttg
gagcagagcatcgaacctgctgcccagattaaggtcaatctctgtccggcacagtctgtc
acaaccgataagcaggacgaagatgccgctgatgaattcttgcaggcggccgtccatctg
cagccgatgcccacgtctgcttatcaggaacaagtggaacatatgctcagctggcaatat
gcggacaaaggtttggccaatgttccggccaagctcacggtgacggagatcaagcggcgc
tttgtcgctggtttggagcatgatgaagaactgcctgcggcccgtcagctgattgtcatg
aacgagcaggaagaattggaagcggtagcagaaggcggagaagttcctgcagctgaggca
gaaaaaacagcagaggagataggggcagactggccccgtccacgttttatgcgggagaag
cagaccagtctttcgcccatggaacggggcaccatcatgcatacggtcatgcagcggctg
gatttccatggcgatgtgagctatcagggtatcaaaaagcaggtagaagcattggaagca
aaaggcattctgccggaaggtgccggcaaggtggtctatatcaagggcatacagggcttc
tttgcttcgcccttgggggcgcaggtgcagaacgcccgcaggctttatcgcgagctgccc
ttcagccggatgctcaaggccaaggatttttaccccgaagtgcaggaagaaggggaactg
gttttcacccagggcgtgattgacctgcttgtagaaaccgccgagggtgagcttatcctg
gttgactacaagaccgacaggctgacggatccggcccgtatccggcggcgttatcagatc
cagctggatttgtaccgtgatgccgtggaagcaatcttagggcggcaggtagacaagacc
tatctctatctgttgcagaatggcagctttgtgcctatggatgcagtggagtaa
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