Selenomonas ruminantium subsp. lactilytica: SELR_10360
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Entry
SELR_10360 CDS
T01799
Symbol
varS
Name
(GenBank) putative valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SELR_10360 (varS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sri01007
]
SELR_10360 (varS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sri03016
]
SELR_10360 (varS)
Enzymes [BR:
sri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
SELR_10360 (varS)
Amino acid related enzymes [BR:
sri01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SELR_10360 (varS)
Transfer RNA biogenesis [BR:
sri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SELR_10360 (varS)
Prokaryotic type
SELR_10360 (varS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
DUF6487
Cytochrome_C7
tRNA-synt_1b
Zn_ribbon_8
HypA
ABC_tran_CTD
NCD3G
Motif
Other DBs
NCBI-ProteinID:
BAL82744
UniProt:
I0GPQ7
LinkDB
All DBs
Position
1122035..1124710
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AA seq
891 aa
AA seq
DB search
MSEVMEQENNIPKVYDPQSFEKKWYKFWEDNKLFHAEVDKSKKPYSMVIPPPNVTGQLHM
GHALDNTLQDILIRFRRMQGYNAVWIPGCDHAGIATQAKVEGALREEGTNRYELGREKFL
ERVWDWKEQYGNRIMSQLRSLGSSCDWDRQRFTMDEGCSAAVREVFVSLYEKGLIYQGTR
ITNWCPNCNTAISDIEVEHENEAGHLWHLRYQVEGTDQYVEIATTRPETMFGDTGVAVHP
EDERYKDIVGKTLILPIVNRRIPLFADEYVDKEFGTGAVKVTPAHDPNDFEMGLRHNLEQ
VKVIGNDGHMLEGAGKYEGMDRYECRKALVKELEELGVLVSVEDHEHAVGHCSRCHSTIE
PLVSKQWFVKMESLAKPAMEAVQDGRIKFVPERFSKIYLQWLENIRDWCISRQLWWGHRI
PAWYCDDCGKTSVSRTDLTECPHCHSKHIHQDEDVLDTWFSSGLWPFETMGWPEETEELK
HFYPTATLVTGYDIIFFWVARMVMMGLEFGKDIPFQHVFIHGLVRDSQGRKMSKSLGNGI
DPVEVIEKYGADTLRFMLITGNTPGNDMRFYWERVESARNFANKIWNASRYMLMNLEGFD
KSFKPEEADYTLADRWILSRYARTVRDVTENLDKFELGEAGRMIYEFIWNEFCDWYIELT
KSRLYDKENVRARNTALYVLSYVLEGTLRLLHPFMPFLTEEIWQKVPHDEALKSIMETAW
PAGDEGCISEDIEAQMTAIMETIKTVRNMRAEVGAAPSKKSELILSFTDESLRAVFTENQ
SYLDKLASSDPITILPAGAAKPENAMAGVVSGVEVFLPLKGLIDVEKETARLTKELEKLD
KEISRLAKKLGNEGFLAKAPADVVAGEKEKLAGYEEKKKSVESRMQDLAKL
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtaatggaacaggaaaacaatattccgaaggtttatgacccgcagtcgttt
gagaagaaatggtataagttctgggaggataacaaacttttccacgcagaagtggacaaa
agcaagaagccgtacagcatggtgatcccgccgccaaacgtcacgggccagctgcatatg
gggcatgccctggacaataccctgcaggatattctgatccgtttccgccgcatgcaggga
tacaacgccgtctggattccgggctgtgaccatgccggcatcgccacccaggcaaaggtt
gagggcgctctgcgggaagagggaaccaaccgttacgaactggggcgcgaaaagttcctg
gaacgtgtctgggactggaaggaacagtacggcaaccgcatcatgtcccagctgcgctct
ttgggttcctcctgtgactgggaccgtcagcgcttcaccatggacgaaggctgctctgcc
gctgtccgcgaagtgttcgtgagcctctatgaaaaaggtttgatctatcagggtacccgc
atcaccaactggtgccccaactgcaacacggccatttctgatatcgaagtggagcatgaa
aatgaagccggccatctctggcatctgcgctatcaggtagaaggtacggatcagtatgtg
gaaatcgccaccacccgtccggaaaccatgttcggcgatacgggcgtggctgtgcatccc
gaggatgaacgctataaggatatcgtgggtaagaccttgatcctgcccattgtgaaccgc
cgcatcccgctgtttgccgatgaatatgtagacaaggaatttggtactggtgccgttaag
gtcaccccggctcatgatcccaatgactttgagatggggcttcgccacaatctggaacag
gtcaaggtcatcggcaacgacggccatatgctggaaggtgccggcaagtatgaaggcatg
gaccgctatgaatgccgcaaggccctcgtcaaggaactcgaagaactcggcgtgctggtt
tccgtggaagaccacgaacatgctgtgggccattgctcccgctgccacagcacgattgag
ccgttggtttccaagcagtggttcgtcaagatggagtctttggctaagccggctatggaa
gctgtgcaggatggccgcatcaagttcgtgccggaacgcttcagcaagatttacctgcag
tggctcgaaaacatccgcgactggtgcatttcccgccagctctggtggggccaccgcatt
ccggcctggtactgcgatgactgcggcaagaccagcgtgtcccgcacggatctgacggaa
tgcccgcattgccatagcaagcatatccatcaggacgaagacgtgctggatacctggttc
agctccggcctctggccctttgaaaccatgggctggccggaagagacggaagagctcaag
cacttctatcccacggcaactctggtaacgggctacgacatcatcttcttctgggtagcc
cgcatggtcatgatggggctggaattcggcaaggacattcccttccagcatgtattcatc
cacggtctcgtccgcgacagccagggccgcaagatgagtaagtccctgggcaacggcatc
gatccggtggaagtcatcgaaaagtacggcgccgacaccctgcgcttcatgctgattacg
ggcaacactccgggcaacgacatgcgcttctattgggaacgcgtggaatctgcccgtaac
tttgccaacaaaatctggaacgcttcccgctacatgctcatgaacctcgaaggttttgat
aagagcttcaagccggaagaggctgattataccctggctgaccgctggattctttcccgc
tatgcccgcaccgtgcgcgacgtgacggagaacctcgacaagttcgagctgggcgaagcc
ggccgcatgatttacgaattcatctggaacgagttctgcgactggtacatcgagctcacc
aagtcccgtctctacgacaaggaaaatgtacgggcacgtaatacggctctctacgtactg
agctatgtactggaaggcaccctgcgcctgctgcatcccttcatgcccttcctcacggaa
gagatctggcagaaggttccccatgatgaagccctcaagagcatcatggaaacggcatgg
ccggctggtgacgaaggctgcatcagcgaggacatcgaagcccagatgacggctatcatg
gaaaccatcaagactgtccgcaatatgcgcgcggaagttggtgctgctccgagcaagaag
agcgagcttatcctgagcttcacggacgaatccctgcgcgctgtgttcacggaaaaccag
agctatctggataaattggcatcttctgatcccatcaccatcctgccggctggtgccgca
aaaccagaaaatgccatggccggtgtggtcagcggcgtggaagtattcctgcccctcaag
ggcctcatcgatgtggagaaggaaaccgcccgcctcacgaaggaactggagaagctggac
aaggaaatcagccgtctggccaagaaattgggcaatgaaggcttcctggccaaggctcct
gccgatgtcgtagcaggtgagaaggagaaactggctggttacgaggaaaagaaaaaatct
gtggaaagccgtatgcaggacttggctaaactttga
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