Selenomonas ruminantium subsp. lactilytica: SELR_11810
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Entry
SELR_11810 CDS
T01799
Symbol
uvrA
Name
(GenBank) putative excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SELR_11810 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sri03400
]
SELR_11810 (uvrA)
DNA repair and recombination proteins [BR:
sri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SELR_11810 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SELR_11810 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
ATPase
AAA_23
AAA_33
AAA_25
nSTAND3
AAA_21
AAA_22
NACHT
Viral_helicase1
cobW
DUF3090
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
BAL82889
UniProt:
I0GQ52
LinkDB
All DBs
Position
1278213..1281041
Genome browser
AA seq
942 aa
AA seq
DB search
MEQFIKIKGARAHNLKNINVDIPRDKLVVVTGLSGSGKSSLAFDTVYAEGQRRYVESLSS
YARQFLGQMDKPDVDNIDGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLFARAGRPH
CPKCGKPITQQTVDQMVDQIKELPERTKLLIMAQVVRGKKGEHRKILDHIRHEGYVRVRI
DGEIFDINDDINLEKNKKHTIEVVIDRLVVREGMDQRLADSLETALKLGEGVVYVQIVDG
ETLMFSENFACVDCGISLPEITPRMFSFNSPFGACPVCMGLGSHMEFDEELVIPDPRLSV
GGGVFAPLSKNPHSYAMCAMAAVLRDYGCDMDTPWKDLDKKTQKVLLYGSKDEKFRFHYV
NMFGENKEYNVEFEGVMPTLSRRYHETDSDEMRESYENYMTEIPCSACHGARLKPETLSV
LVGGKNIHEVTNMNIREAEEFFQNLELTPREEKIAKQILKEIHARLNFLLNVGLDYLTLS
RAAGTLSGGEAQRIRLATQIGSGLQGVLYVLDEPSIGLHQRDNNRLLETLKNLRDLGNTL
LVVEHDEDTMYAADHIIDIGPGAGEHGGQVVAQGTAQEIMQVPESVTGQYLSRKKFIPVP
SRRRPGNGNFLEVVGAAENNLKDINVKFPLGTLTLVTGVSGSGKSTLVNEILYKGIASRL
YHAKGKPGKHKKIKGLEHIDKIIDIDQQPIGRTPRSNPATYTGVFDAIRDLFSQTSEAKV
RGYKPGRFSFNVKGGRCEACKGDGILKIEMHFLPDVYVPCEVCKGARYNRETLEVRYKGK
TIADVLDMTIDEAVAFFANVPRIARKLQIIQDVGLGYIKLGQPATTLSGGEAQRVKLATE
LSRRSTGKTLYILDEPTTGLHSADIHKLLGILQRLVDGGDTVVVIEHNLDVIKTADYIID
LGPEGGDKGGTIVASGRPEDIVKVPASYTGKFLKPLLEEKNE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatttatcaaaataaagggcgcccgcgcccataatcttaaaaatatcaatgtg
gatatcccgcgggacaagcttgtggtagttacaggattatctggttcgggcaagtcctcg
ttggcttttgatacggtctacgcggaagggcagcggcgctatgtggagtcgctgtcctcc
tatgcccggcagtttctggggcagatggacaagcccgacgtggataatatcgatggcctg
tcgccagctatatccattgaccagaagaccaccagccataatccccgttccaccgtgggc
acggtgacggagatttacgattacctgcgtctgctctttgcccgggcggggcggccccac
tgccccaagtgcggcaagcccatcacccagcagaccgtggatcagatggtggatcagatc
aaggaactgccggagcgcacgaagcttttgatcatggctcaggtagtgcggggcaagaag
ggggagcatcgcaagattcttgaccatattcgccatgagggctatgtgcgggtgcgcatt
gacggggaaatcttcgacatcaacgacgacatcaatcttgagaagaacaagaagcatacc
atcgaagtggtcattgaccggctggttgttcgcgaaggcatggatcagcggctggcggat
tcgctggaaacggcgttgaagctgggtgaaggcgtcgtctatgtgcagattgtggatggc
gaaaccttgatgttcagtgagaacttcgcctgcgtggactgtggcatcagcctgccagaa
atcacgccgcgcatgttctccttcaacagtccttttggggcctgcccggtttgtatggga
ctgggcagtcatatggaatttgacgaggaactggtgattcccgatcctcggctttccgtg
gggggcggtgtgtttgcgcccctgtcgaaaaatccccattcctatgccatgtgtgccatg
gcagcggtgctgcgtgattatggctgtgatatggatacgccctggaaagatttggacaag
aaaacgcagaaggtcctgctctatggctcgaaagatgaaaaattccgcttccactatgtc
aatatgtttggcgagaacaaggaatacaatgtggaatttgagggcgtgatgcccaccttg
tcccgccgttaccatgagacggattcagatgagatgcgggagtcctatgagaactatatg
acggagattccctgctccgcttgccatggggcaagacttaaacctgaaactttgtctgta
ttagtgggcggcaaaaatatccatgaagttaccaatatgaatatccgggaggcagaggaa
ttcttccagaatctggaactgacgccgcgggaagaaaagattgccaagcagatcctcaag
gaaatccatgcacgcttgaatttcctgctgaatgtcggcttggactatctgaccttatcc
cgggcggcgggcactttgtccggtggcgaggcccagcgtatccggctggccacccagatt
ggttccggtctgcagggggtgctctatgttttggacgaacccagcattggcctgcatcag
cgggacaacaaccgactgttggaaactctcaagaatctgcgggatttaggcaataccctg
ctggtggtggagcatgatgaagataccatgtacgctgctgaccatatcatcgacatcggc
cctggggccggggaacatggcggccaagtggtggctcagggtacggcccaggaaatcatg
caggtgcccgagtcggtgactggtcaatacctgtcccgcaagaaatttattcctgtgccc
tcccgccgtcgtccggggaatggcaatttccttgaagtggtcggtgcggcagaaaacaat
ctcaaggacatcaatgtgaaattccccctgggcactctgaccttggtaacgggcgtgtcc
ggttcaggcaagagtaccctggtcaatgagatcctttacaagggcattgcctcccgtctc
taccatgccaagggcaagccggggaagcataagaagatcaaggggctggaacatatcgac
aagatcatcgatattgaccagcagcccattggccgcaccccccgttccaatccggcaact
tataccggcgtttttgacgccattcgggatctgttcagccagaccagcgaagccaaggtg
cgcggctataagccgggacgcttcagcttcaatgtgaaaggggggcgctgtgaagcctgc
aagggcgatggcatcttgaaaatagaaatgcatttcctgccggatgtctatgtgccctgc
gaggtctgcaagggagcccgctacaatcgggaaactttggaagtccgctacaagggcaag
accattgctgatgtgctggatatgaccatcgatgaagcagtggctttctttgccaatgtc
ccccgtattgcccggaagctgcagatcattcaggatgtggggttaggctatatcaagctg
gggcagccggctaccactttgtccggcggcgaagcccagcgcgtgaaactggccacggaa
ctatcccgccgcagtacgggcaagacgctctacatcttggacgagcccactacggggctt
cattcggcggatatccataagctgttggggattttgcagcggctggtggatgggggcgat
accgtcgtggtcattgagcataatctcgatgtgattaagacggcggattatattatcgac
ctggggcctgaagggggagataagggaggcaccattgtggcctctggcagacccgaagat
atcgtgaaggttccggcgtcttacactgggaaattcctgaaacccttgcttgaagagaag
aatgaataa
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