Selenomonas ruminantium subsp. lactilytica: SELR_12160
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Entry
SELR_12160 CDS
T01799
Symbol
ispA
Name
(GenBank) putative geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri00900
Terpenoid backbone biosynthesis
sri01100
Metabolic pathways
sri01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SELR_12160 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sri01006
]
SELR_12160 (ispA)
Enzymes [BR:
sri01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SELR_12160 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SELR_12160 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
SELR_12160 (ispA)
Prenyltransferases [BR:
sri01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SELR_12160 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Plasmid_stab_B
Motif
Other DBs
NCBI-ProteinID:
BAL82924
UniProt:
I0GQ87
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All DBs
Position
1314684..1315565
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AA seq
293 aa
AA seq
DB search
MELKKIWQERSALVEAQLVKELNEANPLDKTLCEAMKYSLMAGGKRLRPVLLMAAADAVG
AKGTDYLTTGCAMEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGAGMATLAGDALLTL
AFEVILRQQGVSAEKLVQVTREISQAAGPDGMVGGQALDMESEDKQISMETMKNIHLGKT
GALFRAAIRSGAILGGADEKALAALTTYADNFGLAFQITDDILDVIGDEAVIGKPVGSDE
KNHKSTYVTLTSLEEAQKLAQEAVDTAVDALQIFGDEADFLRELVAYLVKRNK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaagaaaatctggcaggaacgcagtgctttggtagaagcgcagctggtgaaa
gaattgaatgaagcaaatccgttggacaagacgctctgcgaggcgatgaaatacagcctg
atggctggcggcaaacgcctgcgtcctgtgctgttgatggccgcagccgatgctgtcggg
gctaagggcacggactatctgaccacaggctgtgccatggagatgattcatacctattcc
ctgattcacgatgatctgccagccatggatgatgatgattaccgccgtggcaagctgacc
aaccataaggtctatggtgccggcatggctaccctggccggggatgccctgctgacgctg
gcctttgaagtgatcctgcgccagcagggtgtcagcgcggaaaaactcgtgcaggtaacc
cgggaaatcagccaggcagctggccccgatggcatggtgggcggtcaggctctcgatatg
gaatccgaagacaagcagatttccatggagaccatgaaaaacatccatctgggcaagacc
ggcgccctgttccgagctgccatccgcagcggcgctatcctgggcggtgcggatgaaaag
gctttggcggcactgactacctatgccgataatttcgggctggccttccagattaccgac
gatatcctggatgtcattggcgatgaagctgtgattggcaagccagtgggcagtgacgag
aagaaccataagtccacttatgtgacgctgacttcgctggaagaggcgcagaagctggcc
caggaagccgtggatacggctgtggacgccctgcagatctttggggatgaggcagatttc
ctgcgggaactggtggcctatttggtaaaacgcaataaataa
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