Selenomonas ruminantium subsp. lactilytica: SELR_12180
Help
Entry
SELR_12180 CDS
T01799
Name
(GenBank) putative ribosomal RNA large subunit methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sri03009
]
SELR_12180
Enzymes [BR:
sri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
SELR_12180
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
SELR_12180
Ribosome biogenesis [BR:
sri03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SELR_12180
23S rRNA modification factors
SELR_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
S4_2
SPRY
Motif
Other DBs
NCBI-ProteinID:
BAL82926
UniProt:
I0GQ89
LinkDB
All DBs
Position
1317456..1318265
Genome browser
AA seq
269 aa
AA seq
DB search
MAKQRLDILLVERGLAGSRERAKRMIMAGEVLVDNQKVDKAGATVKAEAEIRLLGNDIPY
VSRGGLKLAKAMAEFGVEIEGKRCADIGASTGGFTDCMLQNGAVQVFAIDVGYGQLAWKL
RTDERVVNMERTNIRNVTPEDIGTLLDFASIDVAFISLTKVLPVTHTLLNDNGEVVALIK
PQFEAGRENVGKKGVVRDPKVHEEVIRKVTAFARETGFCTMALTFSPVKGPEGNIEYLVR
LSKDLTKEDTVTEERILQVVAEAHGELDK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaacgtttagatatacttttggtggaacgtggcctggctggcagccgggaa
cgggccaagcgcatgattatggcgggcgaggtcctcgtggataatcagaaggtggataag
gccggtgctacggtaaaggccgaggccgaaatccgcctattgggcaatgacattccctat
gtgagccggggcggcctgaaattggccaaggccatggccgaatttggtgtggagattgaa
ggcaagcgctgtgccgatatcggcgcatccaccggtggctttaccgactgcatgttgcag
aacggtgctgtgcaggtctttgccatcgatgtgggctatggtcagctggcctggaaattg
cgcaccgatgaacgggtggtcaatatggaacgcaccaatatccgcaatgtgacgccggaa
gatatcggcactttgctggattttgcctccatcgacgtggcctttatctccctgaccaaa
gtattgcctgtcacccataccctgctgaatgataacggtgaagtggtggcgctgatcaag
ccccagttcgaagccggtcgggagaatgtaggcaagaagggcgtcgtccgcgatcccaag
gtccatgaagaagtgatccgcaaggtcacggcctttgcccgggaaaccggtttttgcacg
atggccctgaccttctcaccggtcaaggggccggagggcaatattgaatatctcgtccgc
ctgtccaaagatctgacaaaagaggacacggtcaccgaagaacgcattctgcaggtggtg
gctgaggcccacggcgaactggacaaataa
DBGET
integrated database retrieval system
