Selenomonas ruminantium subsp. lactilytica: SELR_15000
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Entry
SELR_15000 CDS
T01799
Symbol
rfbB
Name
(GenBank) putative dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri00521
Streptomycin biosynthesis
sri00523
Polyketide sugar unit biosynthesis
sri00525
Acarbose and validamycin biosynthesis
sri00541
Biosynthesis of various nucleotide sugars
sri01100
Metabolic pathways
sri01110
Biosynthesis of secondary metabolites
sri01250
Biosynthesis of nucleotide sugars
Module
sri_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SELR_15000 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SELR_15000 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SELR_15000 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SELR_15000 (rfbB)
00525 Acarbose and validamycin biosynthesis
SELR_15000 (rfbB)
Enzymes [BR:
sri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SELR_15000 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
adh_short
Sacchrp_dh_NADP
KR
NifZ
Motif
Other DBs
NCBI-ProteinID:
BAL83208
UniProt:
I0GR21
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All DBs
Position
1561596..1562639
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AA seq
347 aa
AA seq
DB search
MNIVVTGGAGFIGSNFVYYMLKNRPEDKIICFDKLTYAGNMATLDEAMKNKNFKFIRGDI
ADRKAVYRLFEMEKPDVIVNFAAESHVDRSIENPEIFLQTNVIGTSVLLDACRKYGIDRY
HQVSTDEVYGDLPLDRPDLFFTETTNLHTSSPYSASKASADLLVMAYHRTYKIPTTISRC
SNNYGPFHFPEKLIPLMIINALGGKKLPVYGDGLNVRDWLYVEDHCAAINLILQKGKVGE
VYNIGGHNEKANIDVVKTILQQLGKGEDMIEYVTDRKGHDRRYAIDPTKIHDELGWLPAT
KFEDGIKATIQWYLDNRHWWEEIINGEYQDYYERMYEKNSDLEYARI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgttgttaccggtggtgccggttttattggttcgaattttgtttattacatg
ctgaaaaatcgtccggaagataagatcatctgctttgataagctgacttatgcgggcaat
atggctacgctggatgaagccatgaagaataagaacttcaagttcatccgtggggacatt
gctgaccgcaaggccgtttatcgactgtttgaaatggaaaagccggatgtgatcgtgaac
tttgccgcagagtctcatgttgaccggtcaatcgaaaatccggaaatcttcctgcagacc
aatgtgatcggtaccagcgtcctgctggatgcctgccgcaagtatggcattgaccgttac
catcaggtgtccacggatgaagtttatggcgatctgcccctggacagaccggatctgttc
tttacggaaacaacgaacctgcacacgtccagcccgtattcagcctcaaaggcatcggca
gatctgctggtcatggcatatcatcgcacctataagataccgacgacgatttcccgctgt
tccaacaattatggtccgttccatttcccggaaaagctgattccactgatgatcatcaat
gcgttgggcggcaagaagttgccggtatatggtgatggcctcaacgtgcgcgactggctc
tatgtggaagatcattgtgccgccatcaacctgatcctgcagaaaggcaaggtcggtgaa
gtctataatatcggcggccataatgaaaaagccaatatcgatgtggtcaagaccattctg
cagcagcttggcaagggcgaagacatgattgaatacgtcacggaccgcaagggacatgac
cgcagatacgccatcgatccgaccaagatccatgacgaactggggtggctgccggcaacc
aagtttgaagatggcatcaaggcaaccatccagtggtatctggataaccggcattggtgg
gaagaaatcatcaacggtgaataccaggattattatgaacggatgtacgaaaagaattcc
gatttggaatatgcacgcatctga
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