Selenomonas ruminantium subsp. lactilytica: SELR_15760
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Entry
SELR_15760 CDS
T01799
Symbol
dapF
Name
(GenBank) putative diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri00300
Lysine biosynthesis
sri00470
D-Amino acid metabolism
sri01100
Metabolic pathways
sri01110
Biosynthesis of secondary metabolites
sri01120
Microbial metabolism in diverse environments
sri01230
Biosynthesis of amino acids
Module
sri_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SELR_15760 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SELR_15760 (dapF)
Enzymes [BR:
sri01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SELR_15760 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
BAL83284
UniProt:
I0GR97
LinkDB
All DBs
Position
complement(1642185..1643039)
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AA seq
284 aa
AA seq
DB search
MKNFTKWQGCGNDFVLFDCLQEDIQDYAALARKVCDRHYGVGADGILIVLPSDKADFRMR
IFNTDGSEAEMCGNGIRCFARYLYDFGLTEKTSFTVETGAGILVPEIVLADGQVKGVKVD
MGEPHLLGEEIPVVGFDGQKVIDRSMSVAGKEYKFTAVSMGNPHCVIFVDDAENFPIYEL
GHKFETHELFPRKTNTEFVEVRDRRHVRMRVWERGAAVTLACGTGSCATVVAGILNDKLD
REAEVELDGGKLLIHWADNNHVFMTGPAELVFSGELTDCEALSC
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattttacgaagtggcaaggctgcggcaacgattttgttctgttcgattgtctc
caggaagacattcaggattatgcagctttggcccgcaaggtctgtgaccgtcactatggt
gtgggggcagatgggatattgatagtgcttccttctgataaagctgattttcgcatgcgg
atcttcaatacggatggcagtgaggcggagatgtgcggcaacggtatccgttgctttgcg
cgctatctctatgactttggtttgacggaaaagaccagctttaccgtggaaacgggggcg
gggattctcgttccggagatcgtattggcagatggtcaggtcaaaggtgtcaaggtggat
atgggtgagccgcatcttttgggggaagaaatccccgtggttggttttgacggtcagaaa
gtcattgaccggtcaatgtccgtagctggcaaggagtataagttcacggcggtatccatg
ggcaatccccattgtgtgattttcgtggatgatgcggaaaacttccctatctatgagttg
gggcataagtttgagacacatgaattgtttccgcgcaagaccaatacggaatttgtggag
gtcagagaccgtcggcatgtgcgcatgcgggtttgggagcgcggggctgcggtgacgctt
gcctgtggcacgggttcctgtgccacggtagtagccggcatcctcaatgacaagctggat
cgtgaagctgaagtggaactggatgggggcaagctgctgatccattgggcggataacaat
catgtctttatgactggcccggccgaattggtgttcagcggggagctgacggattgtgag
gcattgtcatgttga
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