Selenomonas ruminantium subsp. lactilytica: SELR_15980
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Entry
SELR_15980 CDS
T01799
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri03420
Nucleotide excision repair
sri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SELR_15980 (uvrD)
03430 Mismatch repair
SELR_15980 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sri03400
]
SELR_15980 (uvrD)
Enzymes [BR:
sri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SELR_15980 (uvrD)
DNA repair and recombination proteins [BR:
sri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SELR_15980 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SELR_15980 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
AAA_11
AAA_22
DEAD
Gliadin
Motif
Other DBs
NCBI-ProteinID:
BAL83306
UniProt:
I0GRB9
LinkDB
All DBs
Position
complement(1668402..1670699)
Genome browser
AA seq
765 aa
AA seq
DB search
MDIFAGLNPAQKQAVEHTDGPLLIMAGAGSGKTKVLTCKIANLLAKGVSPWSILAITFTN
KAATEMRERVDRMIGEGAKDVWLSTFHSFCAKFLRREVEATGMYKRNFVIYDSSDSQVVI
KECLKELNLDPKQYAPGAVQNAISNGKNQLMGPKAFERDADNFFQKKVAEVYALYAKKLR
ANNAMDFDDLLMVSVLLLEEHEEIRVKYQNRFKYILVDEYQDTNGAQYQLTKILAAKHHN
LCVVGDADQSIYGWRGADIRNIMDFEQDYPEARTIKLEQNYRSTKNILAAANAVIEHNIN
RKKKDLWTENATGEKLTIYEARDERDEAQFIATTVNKQKTLFNTSYGDMAILYRTNAQSR
VIEEMFMRNGIPYTMVGGLKFYDRKEIKDILAYLRVIYNPLDTVSLLRIINVPKRGIGAS
TIAKLTEYADFNGLTLFDVMSNLDAVEGLTTRAKRPLELFATFIFQFMGYQSNLRLDDLI
EKVLEESGYIKELQDEKKPENESRIENLKEFIGVARDFQKAEDNPTLENFLSTLSLVSDI
DNAELEDDRITLMTLHSAKGLEFPTVFMVGMEEGLFPHSRTLMDENEIEEERRTCYVGIT
RAQRKLYLTCAQQRTIYGKTSASTPSRFLDEIPAEYTERLVPRVNAYGFANANHYGAQQR
SGTMTFRPSASQMGNGANFSDKAKSALEVMNSLQKRGVNVQPQTGVIRPDTSVQWKVGDK
AQHGKWGVGTVVSVKGEGEEVELKIAFPGQGVKGLMQKYAPISKV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
ttggatatttttgcaggactgaatcccgcccagaaacaggcggttgagcatacggatgga
ccacttctcattatggctggcgcaggttccggcaagaccaaggtgctgacatgcaagatt
gccaatctgctggccaagggcgtgtctccctggagcattctggccatcacctttaccaac
aaggctgccactgagatgcgggaacgcgtggaccgcatgatcggcgagggggccaaggat
gtgtggctctccaccttccattccttctgtgccaaattcctgcggcgggaagtcgaagcc
acgggcatgtataagcgcaacttcgtcatctacgacagcagcgacagtcaggtggtcatc
aaggaatgcctgaaagaactgaatctggatcccaaacagtatgcacccggtgccgtgcag
aatgccatttccaacggcaagaaccagcttatgggccccaaggcctttgaacgggatgcg
gataatttcttccagaagaaagtggcagaagtctatgcgctctatgccaagaaactccgg
gccaacaatgctatggactttgatgacctgctgatggtatccgtacttctcttggaggag
catgaggaaatccgcgtaaaataccagaaccgtttcaaatatatcctggtggatgagtat
caggacaccaacggtgcgcagtatcagctgacgaaaatcctggcggccaagcatcataat
ctctgcgtcgtgggtgatgcggaccagtccatctatggctggcgcggtgcggatattcgc
aacatcatggacttcgagcaggattaccccgaagctcgcactatcaagctggagcagaat
taccgttccaccaagaatatcctggcggcagccaatgccgtgattgagcacaacatcaac
cgcaagaagaaagacctttggacggaaaacgccacgggggagaagctgaccatctatgaa
gcccgggatgaacgggatgaagcccagttcatagccaccacggtgaacaagcagaagaca
ctgttcaatacatcctatggcgatatggcgatcctttaccgcaccaatgcccagtcccgt
gtcatcgaggaaatgtttatgcgcaatggcattccctataccatggtgggcggcttgaaa
ttctacgaccgcaaggaaatcaaggatatcctggcgtacctgcgggtgatctacaatccg
ctggatacggtcagcctgttgcgcatcatcaatgtgcctaagcggggcatcggtgccagc
accattgccaagctcacggaatatgcggatttcaacgggctgacactgttcgatgtgatg
tccaatctcgatgcggtggaagggctgacgaccagagccaagcgaccgttggagctcttt
gctaccttcatcttccagttcatgggctatcagagcaatctgcgtttggatgatctgatt
gaaaaggtcttggaagagtccggctacatcaaggaattgcaggatgaaaagaagcccgag
aacgaaagccggattgaaaacctcaaggaattcatcggtgtggcccgggacttccagaag
gcagaggacaatccgacgctggaaaacttcctgtccaccttgtccctggtatcggatatt
gacaatgcggagctggaagatgaccgcatcacgctcatgacgctgcactcggctaaaggt
ctggagttccccacggtcttcatggtgggcatggaagaggggcttttcccgcattcccgt
acgcttatggatgaaaatgagatcgaggaggagcgccgtacctgctatgtgggcatcacc
cgtgcccagcgcaagctctatctgacctgcgcccagcagcgtacgatttatggcaagacc
agcgcatctacgccgtcgcggttcctggatgagattcccgcggaatatacggagcgcctg
gtaccccgtgtcaacgcctatggctttgccaatgccaaccactatggtgcccagcagcgc
agcggtaccatgactttccgcccctctgccagccagatgggcaacggcgcgaacttctcc
gacaaggctaagtcagcgttggaagtcatgaattccctgcagaagcgcggcgtcaatgtc
cagcctcagaccggcgtgatccgtcccgatacttccgtacagtggaaagtcggggataag
gcccagcatggcaagtggggcgtaggaaccgtcgtttccgttaagggcgaaggtgaagaa
gtcgagctcaagatcgcgttcccgggccaaggcgtgaaggggcttatgcagaaatatgcg
cccatcagtaaggtataa
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