Selenomonas ruminantium subsp. lactilytica: SELR_16120
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Entry
SELR_16120 CDS
T01799
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sri03016
]
SELR_16120 (truB)
Enzymes [BR:
sri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SELR_16120 (truB)
Transfer RNA biogenesis [BR:
sri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SELR_16120 (truB)
Prokaryotic type
SELR_16120 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAL83320
UniProt:
I0GRD3
LinkDB
All DBs
Position
complement(1683463..1684350)
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AA seq
295 aa
AA seq
DB search
MTGAKPLSGFLNILKPPGMSSHDIVGYVRRVLHTKKVGHAGTLDPAATGVLPVAVGTATR
LIEYLELTDKTYRAEIKLGIATDSGDDTGRILTSQTDWSDFDKSEIEAVLEKFTGKIRQT
PPAHSAIKINGQRACDLLRAGKEVEVPSREITIYRLELLSYSHDMLLIDCDCSKGTYIRS
LCQDIGEALGVPATMAFLLRRRVGDFSVENALTLEELAAKGAEALLPADEYLSGMQRFDL
NPKREKAFGNGLSSTVRNFTAETEKLRVYADGHFIGIGRYDKDREEILPVKVIGR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacgggggcaaagccgctgagcggcttcctcaatatattgaaacctcccggcatgagt
tcccatgatatcgtgggctatgtccggcgtgtgctccatacgaaaaaggtgggccatgca
ggcacccttgaccctgctgccacaggtgttctgcctgtcgccgtggggacagcaacccgg
ctgatcgagtatctggaactgacggataagacataccgtgcggaaatcaagctgggcatc
gccaccgacagcggtgacgatacgggcaggattttgacaagtcagactgactggtcagat
tttgacaagtcagagattgaagccgtgctggagaagttcaccggcaagatccgccagacg
ccgccagcccattccgccatcaagatcaacggccagagagcctgtgatctcttgcgggcg
ggcaaggaagtggaagtcccctcacgggaaatcacgatttatcggctggagctgctctca
tacagccatgatatgttgctgattgattgtgactgcagcaaggggacctatatccgcagc
ctctgtcaggatattggcgaggctttgggcgtgccggctaccatggctttcctgctgcgg
cggcgggtaggggatttttccgtggaaaatgccctgaccttggaggagttggcggctaaa
ggggcagaagccctgctgcccgccgatgaatatctgagcggcatgcagcgctttgacctg
aatcccaagcgggaaaaggcctttggcaacgggctctccagcaccgtgcgcaatttcacg
gcagagaccgaaaaactgcgggtttatgccgatggccatttcatcggcattggccgttat
gataaagacagagaagaaatcctgccggtaaaggtaatagggcggtga
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