Selenomonas ruminantium subsp. lactilytica: SELR_17560
Help
Entry
SELR_17560 CDS
T01799
Name
(GenBank) putative penicillin-binding protein
KO
K05364
penicillin-binding protein A
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri00550
Peptidoglycan biosynthesis
sri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SELR_17560
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sri01011
]
SELR_17560
Peptidoglycan biosynthesis and degradation proteins [BR:
sri01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SELR_17560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BAL83464
UniProt:
I0GRS7
LinkDB
All DBs
Position
complement(1828242..1829639)
Genome browser
AA seq
465 aa
AA seq
DB search
MSDWKLKRQILQVGAFLLLMVAVLSLYIGYLAVWKGQELAENPLNMRSAAAKADIIRGTI
LDAHGRVLAQTQNDGKRSYPLGSVMAQVTGYNGENIGSAGLEGHANRELLGLTADMTRLG
PISQLLQTDRGNDIKTTIEADAQQAAFDGLNGRKGAVVVLDADTGAVLAMVSSPSYDPNN
VEANWKAMSQQADGPLLNRTVQGLYPPGSTIKPLIADAALTEGVTNEQEIFDCSGVLDVG
GGHSIRESHGEVHGKVDLRKALTESCNVTFGTLGMRLGDDKLKKSFTRFGFDQSIGGEIV
MTSSHLPDFGTLGAGDQAQTAIGQSTLLVTPMHMALLASAFAHGGTVMKPYLVQEVVTPG
GMVVHSTTPEKWLTVTTGEMAAKIHSYMEDVVTKGTGKAAQVSGVEVAGKTGTAENPQGE
DHAWFIGSAKLRNRNIAFAIIVENGGGGGKVAAPIARKIILSLQN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattggaaattaaaacggcaaatattgcaagtcggcgctttcctgctcctgatg
gtggcggtgctttccctttatatcggctatctggccgtttggaaagggcaggagctggcg
gaaaatccgctgaatatgcgcagtgcagccgccaaggctgatattatccgggggacgatc
ctggatgcccatggccgtgtgctggcccagacccagaatgatggcaagcgcagttatcct
ttgggcagtgtgatggctcaggtgacaggctacaatggggagaatattggcagcgccggt
ttggaaggccatgccaatcgggaacttttgggcctgacggcggatatgacgcgcctgggg
ccgatttcccagctgttgcagaccgacaggggcaatgatatcaaaaccaccattgaggct
gatgcccagcaggcggcctttgatggccttaatggccgcaaaggggctgtggtggtgctg
gatgccgatacaggggcagtgctggccatggtcagctcgccctcctatgatcccaataat
gtggaagccaattggaaggccatgtcccagcaggcggatggcccgcttttgaaccgtacg
gtgcagggactctatccgccaggctccaccatcaagcccttgattgcagatgcggccctg
acagagggcgtgaccaatgagcaggagatatttgactgctccggtgtattggatgtaggc
ggcggccattccatccgggaaagccacggggaagtccatggcaaggtggatctgcgcaag
gccttgacggaatcctgcaatgtgacctttggcaccttgggcatgcgcctcggagatgac
aagctcaaaaagtcatttacccggtttggctttgaccagtcaatcggcggagagattgtc
atgacctcgtcccatctgccggacttcggcaccttgggagctggcgatcaggcccagacg
gccattggccagagtacccttttggtaacgcccatgcatatggcgctattggcttcggcc
tttgcccatggcggcacggtgatgaagccgtatctggtgcaggaagtcgtgactcccggc
ggcatggtggttcatagcaccacgccggaaaaatggctgacggtgaccaccggggagatg
gcagcgaaaatccatagctatatggaagatgtagttaccaagggtacaggcaaagctgcc
caggtcagcggcgtggaagtggctggcaagaccggtacggcagagaatccccaaggggaa
gatcatgcctggtttatcggttcggccaaattgcgcaaccgcaatattgcctttgccatc
atcgtggaaaatggcggcggcggcggcaaggtggctgcaccgattgcccgtaagataatc
ttgagtttgcagaactaa
DBGET
integrated database retrieval system
