Selenomonas ruminantium subsp. lactilytica: SELR_21260
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Entry
SELR_21260 CDS
T01799
Symbol
recQ
Name
(GenBank) putative ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sri
Selenomonas ruminantium subsp. lactilytica
Pathway
sri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SELR_21260 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sri03019
]
SELR_21260 (recQ)
03400 DNA repair and recombination proteins [BR:
sri03400
]
SELR_21260 (recQ)
Enzymes [BR:
sri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SELR_21260 (recQ)
Messenger RNA biogenesis [BR:
sri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SELR_21260 (recQ)
DNA repair and recombination proteins [BR:
sri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SELR_21260 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Cytochrom_c_NrfB-like
Motif
Other DBs
NCBI-ProteinID:
BAL83834
UniProt:
I0GSU7
LinkDB
All DBs
Position
2207515..2209296
Genome browser
AA seq
593 aa
AA seq
DB search
MENPYFKQAQTLLRKYYGYPDFRPAQKPVVESLLSGHDTVAIMPTGAGKSICFQLPSLVF
PGITLVISPLISLMKDQVDALAEQGVPATYINSQLTLDQSTARFQAIAEGRYKLVYVAPE
RLDTDYFRYVIERQEISMVAVDEAHCLSQWGHDFRPSYRQIAPFIAGLPRRPLVSAFTAT
ATPEVKDDIISLLHLRQPHIHVTGFDRPNLYFEVRRGEDKKKFIERYLKTHSEEAGVIYA
ATRKEVDSLYEHLLKKKFSVGRYHAGLSDKQRNQAQDDFLYDNVQVIVATNAFGMGIDKS
NVRFVIHYNMPKNIEAYYQEAGRAGRDGEPGTCILLYSPQDVMTQKYLIDVSTENEERKA
HNLGTLQKMVDYCHTPECLRHFIISYFGDASADVTCDNCGNCKAGLEKMDVTIDAQKVFS
CVYRMHERFGLTLVAQVLKGSNDKRVKELKFDKLSTFGLMKERTLADIKLLIQRFIATDY
LGLTESKFPVVTLKPAAYPVLKGQEKVYQAVPKPEMEKEPAAPELFDHLRHLRKEIAIRE
HIPPYMVFSDATLRDMCKVLPETLDQMLDVKGIGEMKLNKYGQEFLDCIQKHK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatccatactttaaacaagcgcagacgttattacgcaaatattacggctatccg
gacttccgccctgcccaaaagcccgtggtggaaagcctgctttccggccatgataccgtg
gccatcatgcccaccggggcaggcaaaagcatctgcttccagctgccttccctggtgttt
cccggcataacccttgtgatttcgcccctgatttccctgatgaaggatcaggtggatgct
ttggccgaacagggagtgcctgctacctatatcaacagccagctgacacttgaccagtca
accgcccgcttccaggccattgccgaaggacgctataagctggtctatgtggcgccggaa
cggctggacacagattatttccgctatgtcatcgagcggcaggaaatctccatggtggcg
gtagacgaagctcactgcctgtcccaatgggggcacgacttccgccccagctaccggcag
attgccccctttatcgccggcctcccccgccgcccgttggtcagtgcctttacggccacg
gccacgccggaggtcaaggacgatatcatcagcctgctgcatctgcgccagcctcatatc
catgtgaccggcttcgaccggcccaatctctatttcgaggtgcgccggggtgaggacaag
aaaaaattcatcgaacgctatctcaaaacccacagtgaagaagccggcgtgatctatgcc
gccacccgcaaggaagtggacagtctctatgaacatctcttgaaaaagaagttttccgta
ggccgctatcatgccggcctgtccgataagcagcgcaatcaggcacaggacgatttcctc
tacgacaatgtgcaggtcatcgtggccaccaacgcctttggcatgggcattgacaagtca
aatgtgcgcttcgtcatccactacaatatgcccaagaacatcgaggcctattatcaggaa
gcgggccgcgcaggccgtgacggcgagccgggcacctgcatcctgctctactccccccag
gacgtcatgacgcagaaatacctcattgacgtatccacggaaaacgaggaacgcaaggcc
cataacctgggcaccctgcagaagatggtggactactgccacaccccggaatgcctgcgg
cacttcatcatcagctactttggtgatgcaagtgccgatgtcacctgcgataattgcggc
aactgcaaggcaggcctcgagaaaatggacgtgaccatcgacgcccaaaaggtcttctcc
tgcgtctaccgcatgcacgaacgtttcggcctgaccttagtggcccaggtgttaaaagga
tccaacgacaagcgggtaaaagagctgaaattcgacaagctttccaccttcggcctgatg
aaggaacggacgctggccgatatcaagctcctgatccagcgctttatcgccacggactat
ctggggctgacggagagcaaattccccgtggtcaccctgaaacccgccgcctatcccgta
ctcaagggacaagaaaaggtatatcaggccgtgcccaaacccgagatggaaaaagagcca
gccgctcccgaactcttcgaccacctgcgccatctgcgcaaggaaatcgccattcgcgaa
cacattccgccctatatggtcttctccgatgccaccctgcgcgatatgtgcaaggtgctg
cctgaaaccctcgaccagatgctcgacgtcaaaggcatcggcgaaatgaaactcaataaa
tacggccaggaattccttgactgcattcaaaaacataaataa
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